SNP Profiles of CL 9 /11   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._CL 9 /11___
CGGGAAAACCCTCCCTCCGGCTATGGCC
2._CL 9 /11___
CGGGAAAACCCTCCCTCCGGCTATGGCC
3._CL 9 /11___
CGGGAAAACCCTCCCTCCGGCTATGGCC
4._CL 9 /11___
CGGGAAAACCCTCCCTCCGGCTATGGCC
5._CL 9 /11___
CGGGAAAACCCTCCCTCCGGCTATGGCC
6._CL 9 /11___
CG___AA_______________CCGGCT______CC
7._CL 9 /11___
CG___AA_______________CCGGCT______CC
8._CL 9 /11___
CG___AA_______________CCGGCT______CC
9._CL 9 /11___
CG___AA_______________CCGGCT______CC
10._CL 9 /11___
CG___AA_______________CCGGCT______CC
11._CL 9 /11___
GG___AA_______________CCTTCC______CC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._CL 9 /11___
CCAAGGCCTTGGGG___CCAAAG___CCGG
2._CL 9 /11___
CCAAGGCCTTGGGGTTCCAAAGAACCGG
3._CL 9 /11___
CCAAGGCCTTGGGGTTCCAAAGAACCGG
4._CL 9 /11___
CCAAGGCCTTGGGG___CCAAAGAACCGG
5._CL 9 /11___
CCAAGGCCTTGGGGTTCCAAAGAACCGG
6._CL 9 /11___
CCAA___CC__________________AG______GG
7._CL 9 /11___
CCAA___CC_________TT______AG______GG
8._CL 9 /11___
CCAA___CC_________TT______AG______GG
9._CL 9 /11___
CCAA___CC__________________AG______GG
10._CL 9 /11___
CCAA___CC_________TT______AG______GG
11._CL 9 /11___
CCAG___CC_________AT______GG______GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._CL 9 /11___
ACACCTAAGGAGCGCCCTAATTAGAGAG
2._CL 9 /11___
ACACCTAAGGAGCGCCCTAATTAGAGAG
3._CL 9 /11___
ACACCTAAGGAGCGCCCTAATTAGAGAG
4._CL 9 /11___
ACACCTAAGGAGCGCCCTAATTAGAGAG
5._CL 9 /11___
ACACCTAAGGAGCGCCCTAATTAGAGAG
6._CL 9 /11___
___ACCT___GG___CGCC______TTAG______
7._CL 9 /11___
___ACCT___GG___CGCC______TTAG______
8._CL 9 /11___
___ACCT___GG___CGCC______TTAG______
9._CL 9 /11___
___ACCT___GG___CGCC______TTAG______
10._CL 9 /11___
___ACCT___GG___CGCC______TTAG______
11._CL 9 /11___
___AACC___GG___CCCC______TTGG______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._CL 9 /11___
TTCTGGAGTTTTGTACCGAAGGGGCTCG
2._CL 9 /11___
TTCTGGAGTTTTGTACCGAAGGGGCTCG
3._CL 9 /11___
TTCTGGAGTTTTGTACCGAAGGGGCTCG
4._CL 9 /11___
TTCTGGAGTTTTGTACCGAAGGGGCTCG
5._CL 9 /11___
TTCTGGAGTTTTGTACCGAAGGGGCTCG
6._CL 9 /11___
______GG_____________________GG___CT___
7._CL 9 /11___
______GG_____________________GG___CT___
8._CL 9 /11___
______GG_____________________GG___CT___
9._CL 9 /11___
______GG_____________________GG___CT___
10._CL 9 /11___
______GG_____________________GG___CT___
11._CL 9 /11___
______TT_____________________GG___CT___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._CL 9 /11___
AGCTGGCTATTTAACCTTCC___AGGTAT
2._CL 9 /11___
AGCTGGCTATTTAACCTTCCCCAGGTAT
3._CL 9 /11___
AGCTGGCTATTTAACCTTCCCCAGGTAT
4._CL 9 /11___
AGCTGGCTATTTAACCTTCCCCAGGTAT
5._CL 9 /11___
AGCTGGCTATTTAACCTTCCCCAGGTAT
6._CL 9 /11___
___CTGG___ATTTAA____________AG___AT
7._CL 9 /11___
___CTGG___ATTTAA_________CCAG___AT
8._CL 9 /11___
___CTGG___ATTTAA_________CCAG___AT
9._CL 9 /11___
___CTGG___ATTTAA_________CCAG___AT
10._CL 9 /11___
___CTGG___ATTTAA_________CCAG___AT
11._CL 9 /11___
___CTGG___ATTTGG_________CCGG___AT
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._CL 9 /11___
CTGGATCTCTTTCTTTACGGCTTT___GG
2._CL 9 /11___
CTGGATCTCTTTCTTTACGGCT___AAGG
3._CL 9 /11___
CTGGATCTCTTTCTTTACGGCT___AAGG
4._CL 9 /11___
CTGGATCTCTTTCTTTACGGCT___AAGG
5._CL 9 /11___
CTGGATCTCTTTCTTTACGGCT___AAGG
6._CL 9 /11___
_________CT______CT______GGCT_________
7._CL 9 /11___
_________CT______CT______GGCT___AA___
8._CL 9 /11___
_________CT______CT______GGCT___AA___
9._CL 9 /11___
_________CT______CT______GGCT___AA___
10._CL 9 /11___
_________CT______CT______GGCT___AA___
11._CL 9 /11___
_________CC______TT______GTCT___CC___
 85 86 87 88 89 90 91 92 93 94 95    
1._CL 9 /11___
CTCTCTCGAGCT___AAACGGACX_XX_XX_X
2._CL 9 /11___
CTCTCTCGAGCTAAAAACGGACX_XX_XX_X
3._CL 9 /11___
CTCTCTCGAGCTAAAAACGGACX_XX_XX_X
4._CL 9 /11___
CTCTCTCGAGCTAAAAACGGACX_XX_XX_X
5._CL 9 /11___
CTCTCTCGAGCTAAAAACGGACX_XX_XX_X
6._CL 9 /11___
CT___CTCGAGCT_______________X_XX_XX_X
7._CL 9 /11___
CT___CTCGAGCT_______________X_XX_XX_X
8._CL 9 /11___
CT___CTCGAGCT_______________X_XX_XX_X
9._CL 9 /11___
CT___CTCGAGCT_______________X_XX_XX_X
10._CL 9 /11___
CT___CTCGAGCT_______________X_XX_XX_X
11._CL 9 /11___
TT___CCCCAGCT_______________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._CL_9_/11 GC-08-151-3-50

Location: Tree: 1
Notes: 1
 Mars, 2018

2._CL_9_/11 GC-08-151-3-50

Location: Tree: 4
Notes: 4
 Mars, 2018

3._CL_9_/11 GC-08-151-3-50

Location: Tree: 7
Notes: 7
 Mars, 2018

4._CL_9_/11 GC-08-151-3-50

Location: Tree: 9
Notes: 9
 Mars, 2018

5._CL_9_/11 GC-08-151-3-50

Location: Tree: 11
Notes: 11
 Mars, 2018

6._CL_9_/11

Location: 8350 1
 Dapeng Zhang, 2016

7._CL_9_/11

Location: 8350 4
 Dapeng Zhang, 2016

8._CL_9_/11

Location: 8350 7
 Dapeng Zhang, 2016

9._CL_9_/11

Location: 8350 9
 Dapeng Zhang, 2016

10._CL_9_/11

Location: 8350 11
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

11._CL_9_/11

Location: Marper C 520
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133