SNP Profiles of "POUND 7 /B"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
2. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
3. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
4. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
5. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
6. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
7. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
8. _GC-01-114-6-11
______GGGGTT___GG______CCTTCCTT___
9. _1611_2
______GG___TT___________________________
10. _1611_3
______GG___TT___________________________
11. _1611_9
______GG___TT___________________________
12. _1611_13
______GG___TT___________________________
13. _1611_1_>_FP
______GG___TT___________________________
14. _1611_10_>_F
______GG___TT___________________________
15. _1611_11_>_F
______GG___TT___________________________
16. _1611_4_>_FP
______GG___TT___________________________
17. _RUQ_24
TTAC_________TT___CCGG____________TT
18. _RUQ_24B
TTAC_________TT___CCGG____________TT
19. _RUQ_24
______GGCCTT___GG______GGAACCAA___
20. _RUQ_24
______________________________TTCC______
21. _RUQ_24
______GG___TT___________________________
22. _6B_F407_T3
______GG___TT___________________________
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
2. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
3. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
4. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
5. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
6. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
7. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
8. _GC-01-114-6-11
___ACGGCTATGG______AA___CCAAGGCT
9. _1611_2
___ACGGCT____________AA___CCAA___CT
10. _1611_3
___ACGGCT____________AA___CCAA___CT
11. _1611_9
___ACGGCT____________AA___CCAA___CT
12. _1611_13
___ACGGCT____________AA___CCAA___CT
13. _1611_1_>_FP
___ACGGCT____________AA___CCAA___CT
14. _1611_10_>_F
___ACGGCT____________AA___CCAA___CT
15. _1611_11_>_F
___ACGGCT____________AA___CCAA___CT
16. _1611_4_>_FP
___ACGGCT____________AA___CCAA___CT
17. _RUQ_24
ATAC____________CTGG___GG___AA______
18. _RUQ_24B
ATAC____________CTGG___GG___AA______
19. _RUQ_24
___ACCCAGATGG______AA___GGAAGGAG
20. _RUQ_24
___ACGGCT___GG______AA___CCAA___CT
21. _RUQ_24
___ACGGCT____________AA___CCAA___CT
22. _6B_F407_T3
___ACGGCT____________AA___CCAA___CT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
2. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
3. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
4. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
5. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
6. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
7. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
8. _GC-01-114-6-11
______AAAG___GGAACTGG___GGAACCAA
9. _1611_2
__________________AA_________GG______AA
10. _1611_3
__________________AA_________GG______AA
11. _1611_9
__________________AA_________GG______AA
12. _1611_13
__________________AA_________GG______AA
13. _1611_1_>_FP
__________________AA_________GG______AA
14. _1611_10_>_F
__________________AA_________GG______AA
15. _1611_11_>_F
__________________AA_________GG______AA
16. _1611_4_>_FP
__________________AA_________GG______AA
17. _RUQ_24
TTAA___AGAC____________CC____________
18. _RUQ_24B
TTAA___AGAC____________CC____________
19. _RUQ_24
______TTAG___GGAAAGGG___GGAAGG___
20. _RUQ_24
_________AG___GGAA_______________CCAA
21. _RUQ_24
__________________AA_________GG______AA
22. _6B_F407_T3
__________________AA_________GG______AA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
2. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
3. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
4. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
5. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
6. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
7. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
8. _GC-01-114-6-11
______AA___CCCT___GGGTGGGG___AACC
9. _1611_2
____________CCCT______GT___GG___AA___
10. _1611_3
____________CCCT______GT___GG___AA___
11. _1611_9
____________CCCT______GT___GG___AA___
12. _1611_13
____________CCCT______GT___GG___AA___
13. _1611_1_>_FP
____________CCCT______GT___GG___AA___
14. _1611_10_>_F
____________CCCT______GT___GG___AA___
15. _1611_11_>_F
____________CCCT______GT___GG___AA___
16. _1611_4_>_FP
____________CCCT______GT___GG___AA___
17. _RUQ_24
___AA___CC______AG_________GGTTAACC
18. _RUQ_24B
___AA___CC______AG_________GGTTAACC
19. _RUQ_24
AA___AA___CC______GGACGGGG___AAGG
20. _RUQ_24
____________CCCT______GT___GG___AACC
21. _RUQ_24
____________CCCT______GT___GG___AA___
22. _6B_F407_T3
____________CCCT______GT___GG___AA___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
2. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
3. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
4. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
5. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
6. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
7. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
8. _GC-01-114-6-11
AGCT_________AAAA___AATTCCGGGG___
9. _1611_2
___CT_________AA_______________GG______
10. _1611_3
___CT_________AA_______________GG______
11. _1611_9
___CT_________AA_______________GG______
12. _1611_13
___CT_________AA_______________GG______
13. _1611_1_>_FP
___CT_________AA_______________GG______
14. _1611_10_>_F
___CT_________AA_______________GG______
15. _1611_11_>_F
___CT_________AA_______________GG______
16. _1611_4_>_FP
___CT_________AA_______________GG______
17. _RUQ_24
______TTAACCAA___CC______TTGGGGTT
18. _RUQ_24B
______TTAACCAA___CC______TTGGGGTT
19. _RUQ_24
___AG____________AA___AA______CCGG___
20. _RUQ_24
___CT________________________TTGGGG___
21. _RUQ_24
___CT_________AA_______________GG______
22. _6B_F407_T3
___CT_________AA_______________GG______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
2. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
3. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
4. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
5. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
6. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
7. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
8. _GC-01-114-6-11
TTGGTT___AC___GG___CCCCCTCCGGCT
9. _1611_2
________________________CC___CT______CT
10. _1611_3
________________________CC___CT______CT
11. _1611_9
________________________CC___CT______CT
12. _1611_13
________________________CC___CT______CT
13. _1611_1_>_FP
________________________CC___CT______CT
14. _1611_10_>_F
________________________CC___CT______CT
15. _1611_11_>_F
________________________CC___CT______CT
16. _1611_4_>_FP
________________________CC___CT______CT
17. _RUQ_24
_________TTACATTT___CC_________GG___
18. _RUQ_24B
_________TTACATTT___CC_________GG___
19. _RUQ_24
AACCAA___AC___CCGGGG___AGGGGGAG
20. _RUQ_24
______TT___AC_________CCCC____________
21. _RUQ_24
________________________CC___CT______CT
22. _6B_F407_T3
________________________CC___CT______CT
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
2. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
3. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
4. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
5. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
6. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
7. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
8. _GC-01-114-6-11
GGCC___AACTAGCT______TTCG___CTGG
9. _1611_2
GG______AACTAG__________________CTGG
10. _1611_3
GG______AACTAG__________________CTGG
11. _1611_9
GG______AACTAG__________________CTGG
12. _1611_13
GG______AACTAG__________________CTGG
13. _1611_1_>_FP
GG______AACTAG__________________CTGG
14. _1611_10_>_F
GG______AACTAG__________________CTGG
15. _1611_11_>_F
GG______AACTAG__________________CTGG
16. _1611_4_>_FP
GG______AACTAG__________________CTGG
17. _RUQ_24
______CG______AGCTCTAA____________GG
18. _RUQ_24B
______CG______AGCTCTAA______CC___GG
19. _RUQ_24
GGGG___AAAGAG_________AA______AGGG
20. _RUQ_24
_______________AGCC_______________CT___
21. _RUQ_24
GG______AACTAG__________________CTGG
22. _6B_F407_T3
GG______AACTAG__________________CTGG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
2. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
3. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
4. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
5. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
6. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
7. _GC-01-114-6-11
GGAACCGG___TTCC___TTCCGG_________
8. _GC-01-114-6-11
GGAACCGG___TTCCTTTTCCGG_________
9. _1611_2
___AA____________CC______CC____________
10. _1611_3
___AA____________CC______CC____________
11. _1611_9
___AA____________CC______CC____________
12. _1611_13
___AA____________CC______CC____________
13. _1611_1_>_FP
___AA____________CC______CC____________
14. _1611_10_>_F
___AA____________CC______CC____________
15. _1611_11_>_F
___AA____________CC______CC____________
16. _1611_4_>_FP
___AA____________CC______CC____________
17. _RUQ_24
____________CC___CC____________GTAA___
18. _RUQ_24B
____________CC___CC____________GTAACC
19. _RUQ_24
CCAAGGGG_________AAAA___CC_________
20. _RUQ_24
GG______GG___TT________________________
21. _RUQ_24
___AA____________CC______CC____________
22. _6B_F407_T3
___AA____________CC______CC____________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
2. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
3. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
4. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
5. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
6. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
7. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
8. _GC-01-114-6-11
ACTTTT______TTAAGG______TTCCTTCC
9. _1611_2
___TTTT_________AA_________TT___TTCC
10. _1611_3
___TTTT_________AA_________TT___TTCC
11. _1611_9
___TTTT_________AA_________TT___TTCC
12. _1611_13
___TTTT_________AA_________TT___TTCC
13. _1611_1_>_FP
___TTTT_________AA_________TT___TTCC
14. _1611_10_>_F
___TTTT_________AA_________TT___TTCC
15. _1611_11_>_F
___TTTT_________AA_________TT___TTCC
16. _1611_4_>_FP
___TTTT_________AA_________TT___TTCC
17. _RUQ_24
___TT___GG____________GGGG_________CC
18. _RUQ_24B
___TT___GGAT_________GGGG_________CC
19. _RUQ_24
___AAAA______AAAAGG______AAGGAAGG
20. _RUQ_24
___TT_________TT_______________CCTTCC
21. _RUQ_24
___TTTT_________AA_________TT___TTCC
22. _6B_F407_T3
___TTTT_________AA_________TT___TTCC
 127 128 129 130 131 132 133 134 135      
1. _GC-01-114-6-11
AACC______CCAAAC___CCX_XX_XX_XX_XX_X
2. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
3. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
4. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
5. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
6. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
7. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
8. _GC-01-114-6-11
AACC______CCAAACAACCX_XX_XX_XX_XX_X
9. _1611_2
AACC_____________________X_XX_XX_XX_XX_X
10. _1611_3
AACC_____________________X_XX_XX_XX_XX_X
11. _1611_9
AACC_____________________X_XX_XX_XX_XX_X
12. _1611_13
AACC_____________________X_XX_XX_XX_XX_X
13. _1611_1_>_FP
AACC_____________________X_XX_XX_XX_XX_X
14. _1611_10_>_F
AACC_____________________X_XX_XX_XX_XX_X
15. _1611_11_>_F
AACC_____________________X_XX_XX_XX_XX_X
16. _1611_4_>_FP
AACC_____________________X_XX_XX_XX_XX_X
17. _RUQ_24
______CTAT_______________X_XX_XX_XX_XX_X
18. _RUQ_24B
______CTAT_______________X_XX_XX_XX_XX_X
19. _RUQ_24
AAGG______CC___ACAACCX_XX_XX_XX_XX_X
20. _RUQ_24
AA________________________X_XX_XX_XX_XX_X
21. _RUQ_24
AGCC_____________________X_XX_XX_XX_XX_X
22. _6B_F407_T3
AACC_____________________X_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._POUND_7_/B GC-01-114-6-11
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._POUND_7_/B GC-01-114-6-11
Location: Tree: 2
Notes: 2
 Mars, 2018
3._POUND_7_/B GC-01-114-6-11
Location: Tree: 3
Notes: 3
 Mars, 2018
4._POUND_7_/B GC-01-114-6-11
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018
5._POUND_7_/B GC-01-114-6-11
Location: Tree: 9
Notes: 9
 Mars, 2018
6._POUND_7_/B GC-01-114-6-11
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018
7._POUND_7_/B GC-01-114-6-11
Location: Tree: 11
Notes: 11 > FP4
 Mars, 2018
8._POUND_7_/B GC-01-114-6-11
Location: Tree: 13
Notes: 13
 Mars, 2018
9._POUND_7_/B
Location: 1611 2
 Dapeng Zhang, 2016
10._POUND_7_/B
Location: 1611 3
 Dapeng Zhang, 2016
11._POUND_7_/B
Location: 1611 9
 Dapeng Zhang, 2016
12._POUND_7_/B
Location: 1611 13
 Dapeng Zhang, 2016
13._POUND_7_/B
Location: 1611 1 > FP
 Dapeng Zhang, 2016
14._POUND_7_/B
Location: 1611 10 > F
 Dapeng Zhang, 2016
15._POUND_7_/B
Location: 1611 11 > F
 Dapeng Zhang, 2016
16._POUND_7_/B
Location: 1611 4 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

17._POUND_7_/B RUQ 24
 Lambert Motilal, 2023
Population Assignment: 
18._POUND_7_/B RUQ 24B
 Lambert Motilal, 2023
19._POUND_7_/B RUQ 24
Notes: Reading_Collection
 Mars, 2018
20._POUND_7_/B RUQ 24
 Dapeng Zhang, 2014
21._POUND_7_/B RUQ 24
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

22._POUND_7_/B
Location: 6B F407 T3
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP701 67TcSNP702 68TcSNP723 69TcSNP731 70TcSNP739
71TcSNP751 72TcSNP776 73TcSNP799 74TcSNP800 75TcSNP823
76TcSNP835 77TcSNP836 78TcSNP860 79TcSNP872 80TcSNP878
81TcSNP891 82TcSNP894 83TcSNP899 84TcSNP917 85TcSNP929
86TcSNP944 87TcSNP945 88TcSNP953 89TcSNP994 90TcSNP998
91TcSNP999 92TcSNP1010 93TcSNP1019 94TcSNP1034 95TcSNP1041
96TcSNP1053 97TcSNP1060 98TcSNP1062 99TcSNP1063 100TcSNP1075
101TcSNP1096 102TcSNP1111 103TcSNP1112 104TcSNP1126 105TcSNP1144
106TcSNP1149 107TcSNP1156 108TcSNP1165 109TcSNP1175 110TcSNP1205
111TcSNP1230 112TcSNP1237 113TcSNP1242 114TcSNP1253 115TcSNP1270
116TcSNP1275 117TcSNP1293 118TcSNP1309 119TcSNP1350 120TcSNP1383
121TcSNP1401 122TcSNP1404 123TcSNP1414 124TcSNP1439 125TcSNP1442
126TcSNP1458 127TcSNP1484 128TcSNP1520 129TcSNP1524 130TcSNP1527
131Tcm001s00947643 132Tcm002s20575712 133Tcm003s01336581 134Tcm003s07402719 135Tcm006s26664133