SNP Profiles of IMC 78   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_1678
CTCC_________TT___CCGG____________GT
2. _RUQ_1678
______GGCCTT___GG______GGAACCAA___
3. _RUQ_1678
______________________________TTCC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_1678
ATCC____________CTGG___GG___AG______
2. _RUQ_1678
___CCACGGAAGG______AC___CGAGGGAA
3. _RUQ_1678
___CCGTCC___GG______AC______AG___TT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_1678
TTAA___AAAC____________CC____________
2. _RUQ_1678
______TTAA___GGAAAGGG___GGATGG___
3. _RUQ_1678
_________AA___GGAA_______________CCAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_1678
___AA___CCAC___AG_________GGATACCT
2. _RUQ_1678
GG___AA___AC______AGACGGCG___ACAG
3. _RUQ_1678
____________ACCC______GT_________ACCT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_1678
___CTAACCAA___GG___TTGGGGTT______
2. _RUQ_1678
GG____________AA___AA___CCGG___AAAC
3. _RUQ_1678
________________________TT___GG_________
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_1678
___TTACAATT___CC______GG_________CG
2. _RUQ_1678
AA___AC___CCGGGGGGGGGGGGGGGG___
3. _RUQ_1678
TT___AC_________CCCC__________________
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_1678
______AACCCCAA___CC___GG____________
2. _RUQ_1678
AAAAAA_________AA___AGGGCCAAGGGG
3. _RUQ_1678
_________CC____________CT___GG______GG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_1678
CTCC_________GTAAGT___GTAT_________
2. _RUQ_1678
______AAGGCC______AAAA______AGCCGG
3. _RUQ_1678
_____________________TT__________________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _RUQ_1678
AAGG_________GG______TTAA____________
2. _RUQ_1678
______AAGGAACCAGGG______ACAAAAAC
3. _RUQ_1678
_________CCTT___________________________

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._IMC_78 RUQ 1678
 Lambert Motilal, 2023
Population Assignment: 
2._IMC_78 RUQ 1678
Notes: Reading_Collection
 Mars, 2018
3._IMC_78 RUQ 1678
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP619 58TcSNP640 59TcSNP642 60TcSNP644
61TcSNP645 62TcSNP653 63TcSNP660 64TcSNP689 65TcSNP702
66TcSNP723 67TcSNP731 68TcSNP739 69TcSNP751 70TcSNP776
71TcSNP799 72TcSNP800 73TcSNP823 74TcSNP835 75TcSNP836
76TcSNP860 77TcSNP872 78TcSNP891 79TcSNP894 80TcSNP899
81TcSNP917 82TcSNP929 83TcSNP944 84TcSNP945 85TcSNP953
86TcSNP994 87TcSNP998 88TcSNP999 89TcSNP1010 90TcSNP1019
91TcSNP1034 92TcSNP1053 93TcSNP1060 94TcSNP1062 95TcSNP1063
96TcSNP1075 97TcSNP1096 98TcSNP1111 99TcSNP1112 100TcSNP1144
101TcSNP1149 102TcSNP1156 103TcSNP1175 104TcSNP1205 105TcSNP1230
106TcSNP1253 107TcSNP1270 108TcSNP1275 109TcSNP1293 110TcSNP1309
111TcSNP1350 112TcSNP1383 113TcSNP1401 114TcSNP1404 115TcSNP1414
116TcSNP1439 117TcSNP1442 118TcSNP1458 119TcSNP1484 120TcSNP1520
121TcSNP1524 122TcSNP1527 123Tcm001s00947643 124Tcm003s01336581 125Tcm003s07402719
126Tcm006s26664133