SNP Profiles of "GU 221 /C"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-075-4-11
GGGGAAGGCCTTCCTTAATTTTAAGGAA
2. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTT___GGAA
3. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
4. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
5. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
6. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
7. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
8. _GC-01-075-4-11
GGGGAAGGCCTTCCTTAATTTTAAGGAA
9. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
10. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
11. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
12. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
13. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
14. _GC-01-075-4-11
GGGGATGGCCTTCCTTAATTTTAAGGAA
15. _GC-01-75-4-11
GGCCATGGGGAACCAAAAAAAATTGGAA
16. _1411_2
GG___AT_______________AATTTT______AA
17. _1411_6
GG___AT_______________AATTTT______AA
18. _1411_8
GG___AT_______________AATTTT______AA
19. _1411_9
GG___AT_______________AATTTT______AA
20. _1411_10
GG___AT_______________AATTTT______AA
21. _1411_12
GG___AT_______________AATTTT______AA
22. _1411_14
GG___AT_______________AATTTT______AA
23. _1411_16
GG___AT_______________AATTTT______AA
24. _1411_13_>_F
GG___AT_______________AATTTT______AA
25. _1411_15_>_F
GG___AT_______________AATTTT______AA
26. _1411_15_>_F
GG___AT_______________AATTTT______AA
27. _1411_4_>_FP
GG___AT_______________AATTTT______AA
28. _1411_1_>_FP
GG___AA_______________AATTTT______AA
29. _1411_11
GG___AA_______________AATTTT______AA
30. _RUQ_200
GGCCATGGGGAACCAAAAAAAATTGGAA
31. _RUQ_200
_______________TTCC___AATTTT___GGAA
32. _RUQ_200
GG___AT_______________AATTTT______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCGG
2. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
3. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
4. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
5. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
6. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
7. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
8. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCGG
9. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
10. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
11. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
12. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
13. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
14. _GC-01-075-4-11
CCGGGGCCAAGGGGAATTGGGGTTCCAG
15. _GC-01-75-4-11
GGGGGGGGTTGGGGAAAAGGGGTTGG___
16. _1411_2
CCGG___CC_________AA______GG______AG
17. _1411_6
CCGG___CC_________AA______GG______AG
18. _1411_8
CCGG___CC_________AA______GG______AG
19. _1411_9
CCGG___CC_________AA______GG______AG
20. _1411_10
CCGG___CC_________AA______GG______AG
21. _1411_12
CCGG___CC_________AA______GG______AG
22. _1411_14
CCGG___CC_________AA______GG______AG
23. _1411_16
CCGG___CC_________AA______GG______AG
24. _1411_13_>_F
CCGG___CC_________AA______GG______AG
25. _1411_15_>_F
CCGG___CC_________AA______GG______AG
26. _1411_15_>_F
CCGG___CC_________AA______GG______AG
27. _1411_4_>_FP
CCGG___CC_________AA______GG______AG
28. _1411_1_>_FP
CCGG___CC_________AA______GG______GG
29. _1411_11
CCGG___CC_________AA______GG______GG
30. _RUQ_200
GGGGGGGGTTGGGGAAAAGGGGTTGG___
31. _RUQ_200
CCGG___CC___GGGGAA____________CCAG
32. _RUQ_200
CCGG___CC_________AA______AG______AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-075-4-11
___CCAACCGGGGGGCCCCCCAACCAAAA
2. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
3. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
4. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAA___AGAA
5. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
6. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
7. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
8. _GC-01-075-4-11
___CCAACCGGGGGGCCCCCCAACCAAAA
9. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
10. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
11. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
12. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
13. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
14. _GC-01-075-4-11
___CCAACCGGGGGGCCACCCAACCAGAA
15. _GC-01-75-4-11
AACCAA___GGCCGGCCACGG___GG___AG
16. _1411_2
______AACC___GG___CCAC______CCAG___
17. _1411_6
______AACC___GG___CCAC_________AG___
18. _1411_8
______AACC___GG___CCAC______CCAG___
19. _1411_9
______AACC___GG___CCAC______CCAG___
20. _1411_10
______AACC___GG___CCAC______CCAG___
21. _1411_12
______AACC___GG___CCAC______CCAG___
22. _1411_14
______AACC___GG___CCAC______CCAG___
23. _1411_16
______AACC___GG___CCAC______CCAG___
24. _1411_13_>_F
______AACC___GG___CCAC______CCAG___
25. _1411_15_>_F
______AACC___GG___CCAC______CCAG___
26. _1411_15_>_F
______AACC___GG___CCAC______CCAG___
27. _1411_4_>_FP
______AACC___GG___CCAC______CCAG___
28. _1411_1_>_FP
______AACC___GG___CCCC______CCAA___
29. _1411_11
______AACC___GG___CCCC______CCAA___
30. _RUQ_200
AACCAA___GGCCGGCCACGG___GG___AG
31. _RUQ_200
______AACC___GG___CCACCC___CC______
32. _RUQ_200
______AACC___GG___CCAC______CCAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-075-4-11
AACCCCGGAAGGTTTTAAGG___GGCCCC
2. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
3. _GC-01-075-4-11
AACCCTGG___TTTTTTAAGG___GGCCCC
4. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
5. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
6. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
7. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
8. _GC-01-075-4-11
AACCCCGGAAGGTTTTAAGG___GGCCCC
9. _GC-01-075-4-11
AACCCTGGAATTTT___AAGG___GGCCCC
10. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
11. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
12. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
13. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
14. _GC-01-075-4-11
AACCCTGGAATTTTTTAAGG___GGCCCC
15. _GC-01-75-4-11
AA______CCAAAAAAAAAACCGGCC___GG
16. _1411_2
_________GG_____________________GG___CC
17. _1411_6
_________GG_____________________GG___CC
18. _1411_8
_________GG_____________________GG___CC
19. _1411_9
_________GG_____________________GG___CC
20. _1411_10
_________GG_____________________GG___CC
21. _1411_12
_________GG_____________________GG___CC
22. _1411_14
_________GG_____________________GG___CC
23. _1411_16
_________GG_____________________GG___CC
24. _1411_13_>_F
_________GG_____________________GG___CC
25. _1411_15_>_F
_________GG_____________________GG___CC
26. _1411_15_>_F
_________GG_____________________GG___CC
27. _1411_4_>_FP
_________GG_____________________GG___CC
28. _1411_1_>_FP
_________GG_____________________GG___CC
29. _1411_11
_________GG_____________________GG___CC
30. _RUQ_200
AA______CCAAAAAAAAAACCGGCC___GG
31. _RUQ_200
______CCGGAA______TTAA______GGCCCC
32. _RUQ_200
_________GG_____________________GG___CC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-075-4-11
CCGGCCGGCCAACCGGCCTTCCCCGGGG
2. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
3. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
4. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
5. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
6. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
7. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
8. _GC-01-075-4-11
CCGGCCGGCCAACCGGCCTTCCCCGGGG
9. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
10. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
11. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
12. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
13. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
14. _GC-01-075-4-11
CCGGCCGGCCAATTAACCTTCCCCGGGG
15. _GC-01-75-4-11
GGGGGGGGGGAAAAAA___AA___GGGGCC
16. _1411_2
______CCGG___AATTAA_________CCGG___
17. _1411_6
______CCGG___AATTAA_________CCGG___
18. _1411_8
______CCGG___AATTAA_________CCGG___
19. _1411_9
______CCGG___AATTAA_________CCGG___
20. _1411_10
______CCGG___AATTAA_________CCGG___
21. _1411_12
______CCGG___AATTAA_________CCGG___
22. _1411_14
______CCGG___AATTAA_________CCGG___
23. _1411_16
______CCGG___AATTAA_________CCGG___
24. _1411_13_>_F
______CCGG___AATTAA_________CCGG___
25. _1411_15_>_F
______CCGG___AATTAA_________CCGG___
26. _1411_15_>_F
______CCGG___AATTAA_________CCGG___
27. _1411_4_>_FP
______CCGG___AATTAA_________CCGG___
28. _1411_1_>_FP
______CCGG___AACCGG_________CCGG___
29. _1411_11
______CCGG___AACCGG_________CCGG___
30. _RUQ_200
GGGGGGGGGGAAAAAA___AA___GGGGCC
31. _RUQ_200
___-_______________AACC______CC___GG
32. _RUQ_200
______CCGG___AATTAA_________CCGG___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
2. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
3. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
4. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
5. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
6. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
7. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
8. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
9. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
10. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
11. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
12. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
13. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
14. _GC-01-075-4-11
AACCGGTTCCTTCCCCTTCCTTTTTT___
15. _GC-01-75-4-11
AAGGGG______AAGG___AA___AAAAAGCC
16. _1411_2
AA_________CC______CC______TTTT______
17. _1411_6
AA_________CC______CC______TTTT______
18. _1411_8
AA_________CC______CC______TTTT______
19. _1411_9
AA_________CC______CC______TTTT______
20. _1411_10
AA_________CC______CC______TTTT______
21. _1411_12
AA_________CC______CC______TTTT______
22. _1411_14
AA_________CC______CC______TTTT______
23. _1411_16
AA_________CC______CC______TTTT______
24. _1411_13_>_F
AA_________CC______CC______TTTT______
25. _1411_15_>_F
AA_________CC______CC______TTTT______
26. _1411_15_>_F
AA_________CC______CC______TTTT______
27. _1411_4_>_FP
AA_________CC______CC______TTTT______
28. _1411_1_>_FP
AA_________CC______CC______TTTT______
29. _1411_11
AA_________CC______CC______TTTT______
30. _RUQ_200
AAGGGG______AAGG___AA___AAAAAGCC
31. _RUQ_200
______GGTT__________________TT___CT___
32. _RUQ_200
AA_________CC______CC______TTTT___CC
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-075-4-11
GGTTCCCCCCGGCCCCGGAAAGCCX_XX_X
2. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
3. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
4. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
5. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
6. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
7. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
8. _GC-01-075-4-11
GGTTCCCCCCGGCCCCGGAAAGCCX_XX_X
9. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
10. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
11. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
12. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
13. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
14. _GC-01-075-4-11
GGTTCCCCGGAGCCCCGGAAAACCX_XX_X
15. _GC-01-75-4-11
GGAAGGGGCCAGGGCC___AAAACCX_XX_X
16. _1411_2
___TT___CCGGAGCC_______________X_XX_X
17. _1411_6
___TT___CCGGAGCC_______________X_XX_X
18. _1411_8
___TT___CCGGAGCC_______________X_XX_X
19. _1411_9
___TT___CCGGAGCC_______________X_XX_X
20. _1411_10
___TT___CCGGAGCC_______________X_XX_X
21. _1411_12
___TT___CCGGAGCC_______________X_XX_X
22. _1411_14
___TT___CCGGAGCC_______________X_XX_X
23. _1411_16
___TT___CCGGAGCC_______________X_XX_X
24. _1411_13_>_F
___TT___CCGGAGCC_______________X_XX_X
25. _1411_15_>_F
___TT___CCGGAGCC_______________X_XX_X
26. _1411_15_>_F
___TT___CCGGAGCC_______________X_XX_X
27. _1411_4_>_FP
___TT___CCGGAGCC_______________X_XX_X
28. _1411_1_>_FP
___TT___CCCCGGCC_______________X_XX_X
29. _1411_11
___TT___CCCCGGCC_______________X_XX_X
30. _RUQ_200
GGAAGGGGCCAGGGCC___AAAACCX_XX_X
31. _RUQ_200
______CCCCGGAG__________________X_XX_X
32. _RUQ_200
___TT___CCGGAGCC_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._GU_221_/C GC-01-075-4-11
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._GU_221_/C GC-01-075-4-11
Location: Tree: 2
Notes: 2
 Mars, 2018
3._GU_221_/C GC-01-075-4-11
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018
4._GU_221_/C GC-01-075-4-11
Location: Tree: 6
Notes: 6
 Mars, 2018
5._GU_221_/C GC-01-075-4-11
Location: Tree: 8
Notes: 8
 Mars, 2018
6._GU_221_/C GC-01-075-4-11
Location: Tree: 9
Notes: 9
 Mars, 2018
7._GU_221_/C GC-01-075-4-11
Location: Tree: 10
Notes: 10
 Mars, 2018
8._GU_221_/C GC-01-075-4-11
Location: Tree: 11
Notes: 11
 Mars, 2018
9._GU_221_/C GC-01-075-4-11
Location: Tree: 12
Notes: 12
 Mars, 2018
10._GU_221_/C GC-01-075-4-11
Location: Tree: 13
Notes: 13 > FP3
 Mars, 2018
11._GU_221_/C GC-01-075-4-11
Location: Tree: 14
Notes: 14
 Mars, 2018
12._GU_221_/C GC-01-075-4-11
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018
13._GU_221_/C GC-01-075-4-11
Location: Tree: 16
Notes: 16
 Mars, 2018
14._GU_221_/C GC-01-075-4-11
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018
15._GU_221_/C GC-01-75-4-11
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018
16._GU_221_/C
Location: 1411 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
17._GU_221_/C
Location: 1411 6
 Dapeng Zhang, 2016
18._GU_221_/C
Location: 1411 8
 Dapeng Zhang, 2016
19._GU_221_/C
Location: 1411 9
 Dapeng Zhang, 2016
20._GU_221_/C
Location: 1411 10
 Dapeng Zhang, 2016
21._GU_221_/C
Location: 1411 12
 Dapeng Zhang, 2016
22._GU_221_/C
Location: 1411 14
 Dapeng Zhang, 2016
23._GU_221_/C
Location: 1411 16
 Dapeng Zhang, 2016
24._GU_221_/C
Location: 1411 13 > F
 Dapeng Zhang, 2016
25._GU_221_/C
Location: 1411 15 > F
 Dapeng Zhang, 2016
26._GU_221_/C
Location: 1411 15 > F
 Dapeng Zhang, 2016
27._GU_221_/C
Location: 1411 4 > FP
 Dapeng Zhang, 2016
28._GU_221_/C
Location: 1411 1 > FP
 Dapeng Zhang, 2016
29._GU_221_/C
Location: 1411 11
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

30._GU_221_/C RUQ 200
Notes: Reading_Collection
 Mars, 2018
31._GU_221_/C RUQ 200
 Dapeng Zhang, 2014
32._GU_221_/C RUQ 200
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133