SNP Profiles of "GU 147 /H"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-080-4-16
GGGGATGGCCTTCCTT___TTTTAAGGAA
2. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
3. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
4. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
5. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
6. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
7. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
8. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
9. _GC-01-080-4-16
GGGGATGGCCTTCCTTAATTTTAAGGAA
10. _GC-01-80-4-16
GG___ATGGGGAACCAAAAAAAATTGGAA
11. _1416_2
GG___AT_______________AATTTT______AA
12. _1416_7
GG___AT_______________AATTTT______AA
13. _1416_12
GG___AT_______________AATTTT______AA
14. _1416_13
GG___AT_______________AATTTT______AA
15. _1416_16
GG___AT_______________AATTTT______AA
16. _1416_1_>_FP
GG___AT__________________TTTT______AA
17. _1416_14_>_F
GG___AT_______________AATTTT______AA
18. _1416_15_>_F
GG___AT_______________AATTTT______AA
19. _1416_5_>_FP
GG___AT_______________AATTTT______AA
20. _RUQ_222
GGCCATGGGGAACCAAAAAAAATTGGAA
21. _RUQ_222
_______________TTCC___AATTTT___GGAA
22. _RUQ_222
GG___AT_______________AATTTT______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
2. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
3. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
4. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
5. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
6. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
7. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
8. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
9. _GC-01-080-4-16
CCGGGGCCAAGGGGAACTGGGGTTCCGG
10. _GC-01-80-4-16
GGGGGGGGTTGGGGAAAGGGGGTTGG___
11. _1416_2
CCGG___CC_________AA______GG______GG
12. _1416_7
CCGG___CC_________AA______GG______GG
13. _1416_12
CCGG___CC_________AA______GG______GG
14. _1416_13
CCGG___CC_________AA______GG______GG
15. _1416_16
CCGG___CC_________AA______GG______GG
16. _1416_1_>_FP
CCGG___CC_________AA______GG______GG
17. _1416_14_>_F
CCGG___CC_________AA______GG______GG
18. _1416_15_>_F
CCGG___CC_________AA______GG______GG
19. _1416_5_>_FP
CCGG___CC_________AA______GG______GG
20. _RUQ_222
GGGGGGGGTTGGGGAAAAGGGGTTGG___
21. _RUQ_222
CCGG___CC___GGGGAA____________CCGG
22. _RUQ_222
CCGG___CC_________AA______GG______GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
2. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
3. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
4. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
5. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
6. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
7. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
8. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
9. _GC-01-080-4-16
___CCAACCGGGGGGCCAACCAACTGGAA
10. _GC-01-80-4-16
AACCAA___GGCCGGCCAAGG___AG___GG
11. _1416_2
______AACC___GG___CCAA______CTGG___
12. _1416_7
______AACC___GG___CCAA______CTGG___
13. _1416_12
______AACC___GG___CCAA______CTGG___
14. _1416_13
______AACC___GG___CCAA______CTGG___
15. _1416_16
______AACC___GG___CCAA______CTGG___
16. _1416_1_>_FP
______AACC___GG___CCAA______CTGG___
17. _1416_14_>_F
______AACC___GG___CCAA______CTGG___
18. _1416_15_>_F
______AACC___GG___CCAA______CTGG___
19. _1416_5_>_FP
______AACC___GG___CCAA______CTGG___
20. _RUQ_222
AACCAA___GGCCGGCCCCGG___GG___AG
21. _RUQ_222
______AACC___GG___CCAACC___CT______
22. _RUQ_222
______AACC___GG___CCAA______CTAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
2. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
3. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
4. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
5. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
6. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
7. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
8. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
9. _GC-01-080-4-16
AACCCTGGAAGGTTTTAAGG___GGCCCC
10. _GC-01-80-4-16
AA______CCAACCAAAAAACCGGCC___GG
11. _1416_2
_________GG_____________________GG___CC
12. _1416_7
_________GG_____________________GG___CC
13. _1416_12
_________GG_____________________GG___CC
14. _1416_13
_________GG_____________________GG___CC
15. _1416_16
_________GG_____________________GG___CC
16. _1416_1_>_FP
_________GG_____________________GG___CC
17. _1416_14_>_F
_________GG_____________________GG___CC
18. _1416_15_>_F
_________GG_____________________GG___CC
19. _1416_5_>_FP
_________GG_____________________GG___CC
20. _RUQ_222
AA______CCAAACAAAAAACCGGCC___GG
21. _RUQ_222
______CCGGAA______TTAA______GGCCCC
22. _RUQ_222
_________GG_____________________GG___CC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
2. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
3. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
4. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
5. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
6. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
7. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
8. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
9. _GC-01-080-4-16
CCGGCCGGCCAACCGGCCTTCCCCGGGG
10. _GC-01-80-4-16
GGGGGGGGGGAAGGGG___AA___GGGGCC
11. _1416_2
______CCGG___AACCGG_________CCGG___
12. _1416_7
______CCGG___AACCGG_________CCGG___
13. _1416_12
______CCGG___AACCGG_________CCGG___
14. _1416_13
______CCGG___AACCGG_________CCGG___
15. _1416_16
______CCGG___AACCGG_________CCGG___
16. _1416_1_>_FP
______CCGG___AACCGG_________CCGG___
17. _1416_14_>_F
______CCGG___AACCGG_________CCGG___
18. _1416_15_>_F
______CCGG___AACCGG_________CCGG___
19. _1416_5_>_FP
______CCGG___AACCGG_________CCGG___
20. _RUQ_222
GGGGGGGGGGAAAGAG___AA___GGGGCC
21. _RUQ_222
___-_______________GGCC______CC___GG
22. _RUQ_222
______CCGG___AACCGG_________CCGG___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
2. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
3. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
4. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
5. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
6. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
7. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
8. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
9. _GC-01-080-4-16
AACCGGTTCCTTCCCCTTCCTTTTTT___
10. _GC-01-80-4-16
AAGGGG______AAGG___AA___AAAAAA___
11. _1416_2
AA_________CC______CC______TTTT______
12. _1416_7
AA_________CC______CC______TTTT______
13. _1416_12
AA_________CC______CC______TTTT______
14. _1416_13
AA_________CC______CC______TTTT______
15. _1416_16
AA_________CC______CC______TTTT______
16. _1416_1_>_FP
AA_________CC______CC______TTTT______
17. _1416_14_>_F
AA_________CC______CC______TTTT______
18. _1416_15_>_F
AA_________CC______CC______TTTT______
19. _1416_5_>_FP
AA_________CC______CC______TTTT______
20. _RUQ_222
AAGGGG______AAGG___AA___AAAAAACC
21. _RUQ_222
______GGTT__________________TT___TT___
22. _RUQ_222
AA_________CC______CC______TTTT___CC
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
2. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
3. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
4. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
5. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
6. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
7. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
8. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
9. _GC-01-080-4-16
GGTTCCCCCCGGCCCCGGAAGGCCX_XX_X
10. _GC-01-80-4-16
GGAAGGGGGGGGGGCC___AAGGCCX_XX_X
11. _1416_2
___TT___CCCCGGCC_______________X_XX_X
12. _1416_7
___TT___CCCCGGCC_______________X_XX_X
13. _1416_12
___TT___CCCCGGCC_______________X_XX_X
14. _1416_13
___TT___CCCCGGCC_______________X_XX_X
15. _1416_16
___TT___CCCCGGCC_______________X_XX_X
16. _1416_1_>_FP
___TT___CCCCGGCC_______________X_XX_X
17. _1416_14_>_F
___TT___CCCCGGCC_______________X_XX_X
18. _1416_15_>_F
___TT___CCCCGGCC_______________X_XX_X
19. _1416_5_>_FP
___TT___CCCCGGCC_______________X_XX_X
20. _RUQ_222
GGAAGGGGCCAGGGCC___AAAACCX_XX_X
21. _RUQ_222
______CCCCCCGG__________________X_XX_X
22. _RUQ_222
___TT___CCCCGGCC_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._GU_147_/H GC-01-080-4-16
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._GU_147_/H GC-01-080-4-16
Location: Tree: 2
Notes: 2
 Mars, 2018
3._GU_147_/H GC-01-080-4-16
Location: Tree: 5
Notes: 5 > FP2
 Mars, 2018
4._GU_147_/H GC-01-080-4-16
Location: Tree: 7
Notes: 7
 Mars, 2018
5._GU_147_/H GC-01-080-4-16
Location: Tree: 12
Notes: 12
 Mars, 2018
6._GU_147_/H GC-01-080-4-16
Location: Tree: 13
Notes: 13
 Mars, 2018
7._GU_147_/H GC-01-080-4-16
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018
8._GU_147_/H GC-01-080-4-16
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018
9._GU_147_/H GC-01-080-4-16
Location: Tree: 16
Notes: 16
 Mars, 2018
10._GU_147_/H GC-01-80-4-16
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018
11._GU_147_/H
Location: 1416 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
12._GU_147_/H
Location: 1416 7
 Dapeng Zhang, 2016
13._GU_147_/H
Location: 1416 12
 Dapeng Zhang, 2016
14._GU_147_/H
Location: 1416 13
 Dapeng Zhang, 2016
15._GU_147_/H
Location: 1416 16
 Dapeng Zhang, 2016
16._GU_147_/H
Location: 1416 1 > FP
 Dapeng Zhang, 2016
17._GU_147_/H
Location: 1416 14 > F
 Dapeng Zhang, 2016
18._GU_147_/H
Location: 1416 15 > F
 Dapeng Zhang, 2016
19._GU_147_/H
Location: 1416 5 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

20._GU_147_/H RUQ 222
Notes: Reading_Collection
 Mars, 2018
21._GU_147_/H RUQ 222
 Dapeng Zhang, 2014
22._GU_147_/H RUQ 222
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133