SNP Profiles of "CRU 156 (MIS_TTOICGT_GU 175 /P)"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-131-7-08
GGGGATGGCCCTCCCCAAGTCTTTGGAC
2. _GC-01-131-7-08
GGGGATGGCCCTCCCCAAGTCTTTGGAC
3. _GC-01-131-7-08
GGGGATGGCCCTCCCCAAGTCTTTGGAC
4. _GC-01-131-7-08
GGGGATGGCCCTCCCCAAGTCTTTGGAC
5. _GC-01-131-7-08
GGGGATGGCCCTCCCCAAGTCTTTGGAC
6. _1708_1
GG___AT_______________AAGTCT______AC
7. _1708_2
GG___AT_______________AAGTCT______AC
8. _1708_3
GG___AT_______________AAGTCT______AC
9. _1708_5
GG___AT_______________AAGTCT______AC
10. _1708_6
GG___AT_______________AAGTCT______AC
11. _RUQ_880
GGCCTTGGGGAACCAAAAAAAATTGGAA
12. _RUQ_880
_______________TTCC___AATTTT___GGAA
13. _RUQ_880
GG___TT_______________AAGTTT______AA
14. _CAMPUS_1_A_X2_Y1
GG___TT_______________ACGTCT______CC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-131-7-08
GGAGGGCTAAAGAGATCTAGGGAACGAA
2. _GC-01-131-7-08
GGAGGGCTAAAGAGATCTAGGGAACGAA
3. _GC-01-131-7-08
GGAGGGCTAAAGAGATCTAGGGAACGAA
4. _GC-01-131-7-08
GGAGGGCTAAAGAGATCTAGGGAACGAA
5. _GC-01-131-7-08
GGAGGGCTAAAGAGATCTAGGGAACGAA
6. _1708_1
GGAG___CT_________AT______GG______AA
7. _1708_2
GGAG___CT_________AT______GG______AA
8. _1708_3
GGAG___CT_________AT______GG______AA
9. _1708_5
GGAG___CT_________AT______GG______AA
10. _1708_6
GGAG___CT_________AT______GG______AA
11. _RUQ_880
GGGGGGGGTTGGGGAAAAGGGGTTGG___
12. _RUQ_880
CCGG___CC___GGGGAA____________CCAG
13. _RUQ_880
CCGG___CC_________AA______GG______AG
14. _CAMPUS_1_A_X2_Y1
GGAA___CT_________AA______GG______AA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-131-7-08
___CCCCCCGGGTGGCCACCCGGCTAGAG
2. _GC-01-131-7-08
___CCCCCCGGGTGGCCACCCGGCTAGAG
3. _GC-01-131-7-08
___CCCCCCGGGTGGCCACCCGGCTAGAG
4. _GC-01-131-7-08
___CCCCCCGGGTGGCCACCCGGCTAGAG
5. _GC-01-131-7-08
___CCCCCCGGGTGGCCACCCGGCTAGAG
6. _1708_1
______CCCC___GT___CCAC______CTAG___
7. _1708_2
______CCCC___GT___CCAC______CTAG___
8. _1708_3
______CCCC___GT___CCAC______CTAG___
9. _1708_5
______CCCC___GT___CCAC______CTAG___
10. _1708_6
______CCCC___GT___CCAC______CTAG___
11. _RUQ_880
AACCAA___GGCCAGCCCCGG___GG___AA
12. _RUQ_880
______AACC___GG___CCCCCC___CC______
13. _RUQ_880
______AACC___GG___CCCC______CCAA___
14. _CAMPUS_1_A_X2_Y1
______ACCT___GG___GGAC_________AG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-131-7-08
AGTTCCGGGGTTGTGTACGG___CCCCCC
2. _GC-01-131-7-08
AGTTCCGGGGTTGTGTACGG___CCCCCC
3. _GC-01-131-7-08
AGTTCCGGGGTTGTGTACGG___CCCCCC
4. _GC-01-131-7-08
AGTTCCGGGGTTGTGTACGG___CCCCCC
5. _GC-01-131-7-08
AGTTCCGGGGTTGTGTACGG___CCCCCC
6. _1708_1
_________GG_____________________CC___CC
7. _1708_2
_________GG_____________________CC___CC
8. _1708_3
_________GG_____________________CC___CC
9. _1708_5
_________GG_____________________CC___CC
10. _1708_6
_________GG_____________________CC___CC
11. _RUQ_880
AA______CCAACCAAAAAACCGGCC___GG
12. _RUQ_880
______CCGGAA______TTAA______GGCCCC
13. _RUQ_880
_________GG_____________________GG___CC
14. _CAMPUS_1_A_X2_Y1
_________GG_____________________CC___CT
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-131-7-08
CCGGTTGGCTAACTAATTCTCGCTAGGT
2. _GC-01-131-7-08
CCGGTTGGCTAACTAATTCTCGCTAGGT
3. _GC-01-131-7-08
CCGGTTGGCTAACTAATTCTCGCTAGGT
4. _GC-01-131-7-08
CCGGTTGGCTAACTAATTCTCGCTAGGT
5. _GC-01-131-7-08
CCGGTTGGCTAACTAATTCTCGCTAGGT
6. _1708_1
______TTGG___AACTAA_________CTAG___
7. _1708_2
______TTGG___AACTAA_________CTAG___
8. _1708_3
______TTGG___AACTAA_________CTAG___
9. _1708_5
______TTGG___AACTAA_________CTAG___
10. _1708_6
______TTGG___AACTAA_________CTAG___
11. _RUQ_880
GGGGGGGGGGAAGGAA___AA___GGGGCC
12. _RUQ_880
___-_______________AACC______CC___GG
13. _RUQ_880
______CCGG___AACCAG_________CCGG___
14. _CAMPUS_1_A_X2_Y1
______CTGG___AACTAA_________CTGG___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-131-7-08
AACCAGATCCTTTTCCGGACGTCCTTAA
2. _GC-01-131-7-08
AACCAGATCCTTTTCCGGACGTCCTTAA
3. _GC-01-131-7-08
AACCAGATCCTTTTCCGGACGTCCTTAA
4. _GC-01-131-7-08
AACCAGATCCTTTTCCGGACGTCCTTAA
5. _GC-01-131-7-08
AACCAGATCCTTTTCCGGACGTCCTTAA
6. _1708_1
AA_________CC______CC______GTCC___AA
7. _1708_2
AA_________CC______CC______GTCC___AA
8. _1708_3
AA_________CC______CC______GTCC___AA
9. _1708_5
AA_________CC______CC______GTCC___AA
10. _1708_6
AA_________CC______CC______GTCC___AA
11. _RUQ_880
AAGGGG______AAGG___AA___AAAAAACC
12. _RUQ_880
______GGTT__________________TT___TT___
13. _RUQ_880
AA_________CC______CC______TTTT___CC
14. _CAMPUS_1_A_X2_Y1
AA__________________CC______GTCT___AA
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-131-7-08
GGTTCCCTCGAACCCCAGCCAACCX_XX_X
2. _GC-01-131-7-08
GGTTCCCTCGAACCCCAGCCAACCX_XX_X
3. _GC-01-131-7-08
GGTTCCCTCGAACCCCAGCCAACCX_XX_X
4. _GC-01-131-7-08
GGTTCCCTCGAACCCCAGCCAACCX_XX_X
5. _GC-01-131-7-08
GGTTCCCTCGAACCCCAGCCAACCX_XX_X
6. _1708_1
___TT___CTCGAACC_______________X_XX_X
7. _1708_2
___TT___CTCGAACC_______________X_XX_X
8. _1708_3
___TT___CTCGAACC_______________X_XX_X
9. _1708_5
___TT___CTCGAACC_______________X_XX_X
10. _1708_6
___TT___CTCGAACC_______________X_XX_X
11. _RUQ_880
GGAAGGGGCCGGGGCC___ACAGCCX_XX_X
12. _RUQ_880
______CCCCGGGG__________________X_XX_X
13. _RUQ_880
___TT___CCGGGGCC_______________X_XX_X
14. _CAMPUS_1_A_X2_Y1
___CT___CTCGGGCC_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._CRU_156_(MIS_TTOICGT_GU_175_/P) GC-01-131-7-08
Location: Tree: 1
Notes: 1
 Mars, 2018
2._CRU_156_(MIS_TTOICGT_GU_175_/P) GC-01-131-7-08
Location: Tree: 2
Notes: 2
 Mars, 2018
3._CRU_156_(MIS_TTOICGT_GU_175_/P) GC-01-131-7-08
Location: Tree: 3
Notes: 3
 Mars, 2018
4._CRU_156_(MIS_TTOICGT_GU_175_/P) GC-01-131-7-08
Location: Tree: 5
Notes: 5
 Mars, 2018
5._CRU_156_(MIS_TTOICGT_GU_175_/P) GC-01-131-7-08
Location: Tree: 6
Notes: 6
 Mars, 2018
6._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: 1708 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
7._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: 1708 2
 Dapeng Zhang, 2016
8._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: 1708 3
 Dapeng Zhang, 2016
9._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: 1708 5
 Dapeng Zhang, 2016
10._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: 1708 6
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

11._CRU_156_(MIS_TTOICGT_GU_175_/P) RUQ 880
Notes: Reading_Collection
 Mars, 2018
12._CRU_156_(MIS_TTOICGT_GU_175_/P) RUQ 880
 Dapeng Zhang, 2014
13._CRU_156_(MIS_TTOICGT_GU_175_/P) RUQ 880
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

14._CRU_156_(MIS_TTOICGT_GU_175_/P)
Location: CAMPUS 1 A X2 Y1
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133