SNP Profiles of "GU 241 /P" View Data

Key

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
1. _8838_1	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
2. _8838_2	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
3. _8838_3	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
4. _8838_9	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
5. _8838_10	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
6. _RUQ_1431	GG	CC	AT	GG	GG	AA	CC	AA	AA	AA	AA	TT	GG	AA
7. _RUQ_1431	___	___	___	___	___	TT	CC	___	AA	TT	TT	___	GG	AA
8. _RUQ_1431	GG	___	AT	___	___	___	___	___	AA	GT	TT	___	___	AA
9. _CAMPUS_1_A_X2_Y33	GG	___	AT	___	___	___	___	___	AA	TT	TT	___	___	AA
10. _MITC-000612	GG	CC	AT	GG	GG	AA	CC	AA	AA	AA	AA	TT	GG	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
1. _8838_1	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
2. _8838_2	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
3. _8838_3	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
4. _8838_9	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
5. _8838_10	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
6. _RUQ_1431	GG	GG	GG	GG	TT	AG	GG	AA	AA	GG	GG	TT	GG	___
7. _RUQ_1431	CC	GG	___	CC	___	AG	GG	AA	___	___	___	___	CC	AG
8. _RUQ_1431	CC	GG	___	CC	___	___	___	AA	___	___	GG	___	___	AG
9. _CAMPUS_1_A_X2_Y33	___	GG	___	CC	___	___	___	AA	___	___	AG	___	___	AG
10. _MITC-000612	GG	GG	GG	GG	TT	AG	GG	AA	AA	GG	GG	TT	GG	___

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
1. _8838_1	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
2. _8838_2	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
3. _8838_3	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
4. _8838_9	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
5. _8838_10	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
6. _RUQ_1431	AA	CC	AA	___	GG	CC	GG	CC	AC	GG	GG	___	AG	AA
7. _RUQ_1431	___	___	AA	CC	___	GG	___	CC	AC	CC	CC	___	___	___
8. _RUQ_1431	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
9. _CAMPUS_1_A_X2_Y33	___	___	AA	CC	___	GG	___	CC	AC	___	CC	AG	___	___
10. _MITC-000612	AA	CC	AA	___	GG	CC	GG	CC	AC	GG	GG	___	AG	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
1. _8838_1	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
2. _8838_2	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
3. _8838_3	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
4. _8838_9	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
5. _8838_10	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
6. _RUQ_1431	___	CC	AA	AC	AA	AA	AA	CC	GG	CC	___	GG	GG	GG
7. _RUQ_1431	CC	GG	AA	___	___	TT	AA	___	___	GG	CC	CC	___	GG
8. _RUQ_1431	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
9. _CAMPUS_1_A_X2_Y33	___	GG	___	___	___	___	___	___	___	GG	___	CC	___	___
10. _MITC-000612	___	CC	AA	AC	AA	AA	AA	CC	GG	CC	___	GG	GG	GG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
1. _8838_1	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
2. _8838_2	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
3. _8838_3	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
4. _8838_9	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
5. _8838_10	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
6. _RUQ_1431	GG	GG	GG	AA	AG	AA	___	AA	GG	GG	CC	AA	GG	GG
7. _RUQ_1431	___	___	___	___	___	AA	CC	___	CC	___	GG	___	___	GG
8. _RUQ_1431	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
9. _CAMPUS_1_A_X2_Y33	CC	GG	___	AA	CT	AA	___	___	CC	GG	___	AA	___	___
10. _MITC-000612	GG	GG	GG	AA	AG	AA	___	AA	GG	GG	CC	AA	GG	GG

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
1. _8838_1	___	CC	___	___	CC	___	TT	TT	___	___	___	TT	___	CC
2. _8838_2	___	CC	___	___	CC	___	TT	TT	___	___	___	TT	___	CC
3. _8838_3	___	CC	___	___	CC	___	TT	TT	___	___	___	TT	___	CC
4. _8838_9	___	CC	___	___	CC	___	TT	TT	___	___	___	TT	___	CC
5. _8838_10	___	CC	___	___	CC	___	TT	TT	___	___	___	TT	___	CC
6. _RUQ_1431	___	___	AA	GG	___	AA	AA	AA	AA	CC	GG	AA	GG	GG
7. _RUQ_1431	TT	___	___	___	___	___	TT	___	TT	___	___	___	CC	CC
8. _RUQ_1431	___	CC	___	___	CC	___	TT	TT	___	CC	___	TT	___	CC
9. _CAMPUS_1_A_X2_Y33	___	CC	___	___	CC	___	TT	TT	___	CC	___	TT	___	CC
10. _MITC-000612	___	___	AA	GG	___	AA	AA	AA	AA	CC	GG	AA	GG	GG

	85	86	87	88	89	90	91
1. _8838_1	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2. _8838_2	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3. _8838_3	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4. _8838_9	CG	AG	___	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5. _8838_10	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6. _RUQ_1431	CG	AG	GG	CC	AC	AG	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7. _RUQ_1431	CG	AG	___	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8. _RUQ_1431	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9. _CAMPUS_1_A_X2_Y33	CG	AG	CC	___	___	___	___	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10. _MITC-000612	CG	AG	GG	CC	AC	AG	CC	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Key

Mars Center for Cocoa Science Brazil

1._GU_241_/P

Location: 8838 1

2._GU_241_/P

Location: 8838 2

3._GU_241_/P

Location: 8838 3

4._GU_241_/P

Location: 8838 9

5._GU_241_/P

Location: 8838 10

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

6._GU_241_/P RUQ 1431

View Clone Any

Notes: Reading_Collection

Mars, 2018

7._GU_241_/P RUQ 1431

View Clone Any

Dapeng Zhang, 2014

8._GU_241_/P RUQ 1431

View Clone Any

Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

9._GU_241_/P

View Clone Any

Location: CAMPUS 1 A X2 Y33

Dapeng Zhang, 2016

USDA-SHRS United States of America

10._GU_241_/P MITC-000612

View Clone Any

Mars, 2018

Key to SNP Markers

1	TcSNP25	2	TcSNP28	3	TcSNP32	4	TcSNP42	5	TcSNP60
6	TcSNP75	7	TcSNP90	8	TcSNP122	9	TcSNP144	10	TcSNP150
11	TcSNP151	12	TcSNP154	13	TcSNP174	14	TcSNP193	15	TcSNP226
16	TcSNP230	17	TcSNP240	18	TcSNP242	19	TcSNP316	20	TcSNP329
21	TcSNP364	22	TcSNP372	23	TcSNP413	24	TcSNP418	25	TcSNP429
26	TcSNP430	27	TcSNP448	28	TcSNP469	29	TcSNP497	30	TcSNP521
31	TcSNP529	32	TcSNP534	33	TcSNP547	34	TcSNP560	35	TcSNP561
36	TcSNP577	37	TcSNP591	38	TcSNP602	39	TcSNP619	40	TcSNP645
41	TcSNP653	42	TcSNP689	43	TcSNP702	44	TcSNP723	45	TcSNP731
46	TcSNP751	47	TcSNP776	48	TcSNP799	49	TcSNP823	50	TcSNP836
51	TcSNP860	52	TcSNP872	53	TcSNP878	54	TcSNP891	55	TcSNP894
56	TcSNP899	57	TcSNP917	58	TcSNP929	59	TcSNP944	60	TcSNP953
61	TcSNP994	62	TcSNP998	63	TcSNP999	64	TcSNP1034	65	TcSNP1060
66	TcSNP1062	67	TcSNP1063	68	TcSNP1075	69	TcSNP1096	70	TcSNP1111
71	TcSNP1126	72	TcSNP1144	73	TcSNP1149	74	TcSNP1156	75	TcSNP1165
76	TcSNP1175	77	TcSNP1253	78	TcSNP1270	79	TcSNP1309	80	TcSNP1350
81	TcSNP1383	82	TcSNP1414	83	TcSNP1439	84	TcSNP1442	85	TcSNP1458
86	TcSNP1484	87	TcSNP1520	88	Tcm001s00947643	89	Tcm003s01336581	90	Tcm003s07402719
91	Tcm006s26664133