SNP Profiles of KER 6   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_408
__________________________________________
2. _RUQ_408
TTCC_________CT___CCGG____________TT
3. _RUQ_408
______GGCCTT___GG______GGAACCAA___
4. _RUQ_408
______________________________TTCC______
5. _MITC-000028
______GGCCTT___GG______GGAACCAA___
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_408
___AA___CT___GG______AA___GGGG______
2. _RUQ_408
ATAA____________CCGG___GT___GG______
3. _RUQ_408
___AAAAAGTTGG______AA___GGGGGGGG
4. _RUQ_408
___AATTCT___GG______AA___CCGG___CC
5. _MITC-000028
___AAAAAGTTGG______AA___GGGGGGGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_408
_______________GGAATT____________CC___
2. _RUQ_408
CTAA___AGAA____________CT____________
3. _RUQ_408
______TTAG___GGAAAAGG___GGATGG___
4. _RUQ_408
_________AG___GGAA_______________CCAG
5. _MITC-000028
______TTAG___GGAAAAGG___GGATGG___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_408
______________________________CC___ACCC
2. _RUQ_408
___AA___CCAA___AG_________CCAAACCC
3. _RUQ_408
AA___CC___AC______AGACAGCC___ACGG
4. _RUQ_408
____________ACCT______GT___CC___ACCC
5. _MITC-000028
AA___CC___AC______AGACAGCC___ACGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_408
AA____________________________________TT
2. _RUQ_408
______CCAGCCAA___CC___CCGGAGCT___
3. _RUQ_408
___GG____________GG___AA___CCAG___AA
4. _RUQ_408
___CC_____________________CCGGAG______
5. _MITC-000028
___GG____________GG___AA___CCAG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_408
__________________GGCCGGCC____________
2. _RUQ_408
______TTAAAACT___GG_________AG______
3. _RUQ_408
ACAA___AA___CCGGCC___GGGGAGAGGG
4. _RUQ_408
___TT___AA_________GGCCCC____________
5. _MITC-000028
ACAA___AA___CCGGCC___GGGGAGAGGG
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_408
_________CC_______________CC___CC______
2. _RUQ_408
___CC______AGCTCCAA______TT___AG___
3. _RUQ_408
GG___AAGGAG_________AA______GGAGCC
4. _RUQ_408
____________AGCC_______________CC___GG
5. _MITC-000028
GG___AAGGAG_________AA______GGAGCC
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_408
______GG___TT___________________________
2. _RUQ_408
_________TT___CT_________TTAATTTT___
3. _RUQ_408
AAGGGG_________AAGGAC_________AAAG
4. _RUQ_408
______GG___TT_____________________TT___
5. _MITC-000028
AAGGGG_________AAGGAC_________AAAG
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _RUQ_408
________________________CT___CC_________
2. _RUQ_408
GTTT_________AGGG_________GG______CT
3. _RUQ_408
______AGACGG______AAAGGGCCAGAG___
4. _RUQ_408
______CT_______________CTCCGGAG______
5. _MITC-000028
______AGACGG______AAAGGGCCAGAG___
 127 128 129 130 131          
1. _RUQ_408
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_408
AT____________X_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_408
___CCAAAAACX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_408
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X
5. _MITC-000028
___CCAAAAACX_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._KER_6 RUQ 408
 Jocelyn De Wever et al., 2019
2._KER_6 RUQ 408
 Lambert Motilal, 2023
Population Assignment: 
3._KER_6 RUQ 408
Notes: Reading_Collection
 Mars, 2018
4._KER_6 RUQ 408
 Dapeng Zhang, 2014

USDA-SHRS United States of America

5._KER_6 MITC-000028
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1237
111TcSNP1253 112TcSNP1270 113TcSNP1275 114TcSNP1293 115TcSNP1309
116TcSNP1350 117TcSNP1383 118TcSNP1401 119TcSNP1404 120TcSNP1414
121TcSNP1439 122TcSNP1442 123TcSNP1458 124TcSNP1484 125TcSNP1520
126TcSNP1524 127TcSNP1527 128Tcm001s00947643 129Tcm003s01336581 130Tcm003s07402719
131Tcm006s26664133