SNP Profiles of GU 144 /C   View Data

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 Key

 1234567891011121314
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GU_144_/C
AACCCC____CCCCGG_CC__
2._GU_144_/C
AACCCC____CCCCGG_CC__
3._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GU_144_/C
AACCCC____CCCCGG_CC__
7._GU_144_/C
AACCCC____CCCCGG_CC__
8._GU_144_/C
AACCCC____CCCCGG_CC__
9._GU_144_/C
AACCCC____CCCCGG_CC__
10._GU_144_/C
AACCCC____CCCCGG_CC__
11._GU_144_/C
AACCCC____CCCCGG_CC__
12._GU_144_/C
AACCCC____CCCCGG_CC__
13._GU_144_/C
AACCCC____CCCCGG_CC__
14._GU_144_/C
AACCCC____CCCCGG_CC__
15._GU_144_/C
AACCCC____CCCCGG_CC__
16._GU_144_/C
AACCCC____CCCCGG_CC__
17._GU_144_/C
AACCCC____CCCCGG_CC__
18._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
19._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
20._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
21._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
22._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
23._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
24._GU_144_/C
AACCCC____CCCCGG_CC__
25._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
26._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
27._GU_144_/C
AACCCC____CCCCGG_CC__
28._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
29._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
30._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
31._GU_144_/C
AACCCC____CCCCGG_CC__
32._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
33._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
34._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
35._GU_144_/C
AACCCC____CCCCGG_CC__
36._RUQ_191
AACCCC____CCCCGG_CC__
37._RUQ_191
_CCCC__CC_CC__TTCC__
38._GU_144_/C
AACCAC____CCCCGG_CC__
39._GU_144_/C
AACCAC____CCCCGG_CC__
40._GU_144_/C
AACCAC____CCCCGG_CC__
41._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
42._GC-08-224-6-20
AACCACGGGGCTCCCCCCGGTTCCTTAA
43._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
44._GU_144_/C
ATTTAC____CCCCGG_CC__
45._GU_144_/C
ATCTAC____CCCTAG_CT__
46._GC-08-223-6-19
ATTTACAGAGCTCTCCCCGGTTCCCTAA
47._GC-08-224-6-20
ATCTACAGAGCTCTCCCTAGTTCTTTAT
48._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
49._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
50._RUQ_191
AA_CCGGGG_GGGG_GGAAGGAATT
51._MITC-000578
AA_CCGGGG_GGGG_GGAAGGAATT
52._MITC-000615
AA_CCGGGG_GGGG_GGAAGGAATT
53._GC-01-73-4-9
AA_ACGGGG_GGGG_GGAAGGAATT
 1516171819202122232425262728
_Input profile
CCGGGGCCGGCTAATTGGAAAACCGGAA
1._GU_144_/C
_GG__GG____AAAA_GGAA
2._GU_144_/C
_GG__GG____AAAA_GGAA
3._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
4._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
5._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
6._GU_144_/C
_GG__GG____AAAA_GGAA
7._GU_144_/C
_GG__GG____AAAA_GGAA
8._GU_144_/C
_GG__GG____AAAA_GGAA
9._GU_144_/C
_GG__GG____AAAA_GGAA
10._GU_144_/C
_GG__GG____AAAA_GGAA
11._GU_144_/C
_GG__GG____AAAA_GGAA
12._GU_144_/C
_GG__GG____AAAA_GGAA
13._GU_144_/C
_GG__GG____AAAA_GGAA
14._GU_144_/C
_GG__GG____AAAA_GGAA
15._GU_144_/C
_GG__GG____AAAA_GGAA
16._GU_144_/C
_GG__GG____AAAA_GGAA
17._GU_144_/C
_GG__GG____AAAA_GGAA
18._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
19._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
20._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
21._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
22._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
23._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
24._GU_144_/C
_GG__GG____AAAA_GGAA
25._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
26._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
27._GU_144_/C
_GG__GG____AAAA_GGAA
28._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
29._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
30._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
31._GU_144_/C
_GG__GG____AAAA_GGAA
32._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
33._GC-01-073-4-09
CCGGGGCCGGCTAA_GGAAAACCGGAA
34._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
35._GU_144_/C
_GG__GG____AAAA_GGAA
36._RUQ_191
_GG__GG____AAAA_GGAA
37._RUQ_191
___CC____GG_AACCGG_
38._GU_144_/C
_GG__GG____TTAA_GGAA
39._GU_144_/C
_GG__GG____TTAA_GGAA
40._GU_144_/C
_GG__GG____TTAA_GGAA
41._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
42._GC-08-224-6-20
CCGGGG_GGTTAATTGGTTAACCGGAA
43._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
44._GU_144_/C
_AA__CC____ATAA_GGAA
45._GU_144_/C
_GG__CG____ATAA_CCAT
46._GC-08-223-6-19
CCAACGCCCCCCAATTGGATAACGGGAA
47._GC-08-224-6-20
AAGGCGCGCGCTAACTGGATAACGCCAT
48._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
49._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
50._RUQ_191
CCGGCC_GGAGGGAAGGAAAAGGCCAA
51._MITC-000578
CCGGCC_GGAGGGAAGGAAAAGGCCAA
52._MITC-000615
CCGGCC_GGAGGGAAGGAAAAGGCCAA
53._GC-01-73-4-9
CCGGCC_GGAAGGAAGGTTAAGGCCAA
 2930313233343536373839404142
_Input profile
TTTTGGCCCCAATTGGGGGGAGCCGGTT
1._GU_144_/C
___CC_AATT__GG____
2._GU_144_/C
___CC_AATT__GG____
3._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
4._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
5._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGAGCCGGTT
6._GU_144_/C
___CC_AATT__GG____
7._GU_144_/C
___CC_AATT__GG____
8._GU_144_/C
___CC_AATT__GG____
9._GU_144_/C
___CC_AATT__GG____
10._GU_144_/C
___CC_AATT__GG____
11._GU_144_/C
___CC_AATT__GG____
12._GU_144_/C
___CC_AATT__GG____
13._GU_144_/C
___CC_AATT__GG____
14._GU_144_/C
___CC_AATT__GG____
15._GU_144_/C
___CC_AATT__GG____
16._GU_144_/C
___CC_AATT__GG____
17._GU_144_/C
___CC_AATT__GG____
18._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
19._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
20._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
21._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGAGCCGGTT
22._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGAGCCGGTT
23._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGAGCCGGTT
24._GU_144_/C
___CC_AATT__GG____
25._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
26._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
27._GU_144_/C
___CC_AATT__GG____
28._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
29._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
30._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
31._GU_144_/C
___CC_AATT__GG____
32._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
33._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
34._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGAGCCGGTT
35._GU_144_/C
___CC_AATT__GG____
36._RUQ_191
___CC_AATT__GG____
37._RUQ_191
__GGCCCCAATT__GG__GGTT
38._GU_144_/C
___CC_GGTT__GG____
39._GU_144_/C
___CC_GGTT__GG____
40._GU_144_/C
___CC_GGTT__GG____
41._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGGGCCGGTT
42._GC-08-224-6-20
TTTTGGCCCCGGTTGGGGGGGGCCGGTT
43._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGGGCCGGTT
44._GU_144_/C
___CC_GGGT__AA____
45._GU_144_/C
___GG_AGGG__AA____
46._GC-08-223-6-19
TTGTGGCCCCGGGTGTTTAAAGCCGGTT
47._GC-08-224-6-20
TTGTGGGGCCAGGGGTTTAAGGCCGGTT
48._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGAGGGCC_
49._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGAGGGCC_
50._RUQ_191
AAAAGGCCCCAAAACCCCGGAGGGCC_
51._MITC-000578
AAAAGGCCCCAAAACCCCGGAGGGCC_
52._MITC-000615
AAAAGGCCCCAAAACCCCGGAGGGCC_
53._GC-01-73-4-9
AAAAGGCCCCGGAACCCCGGGGGGCC_
 4344454647484950515253545556
_Input profile
TTAAGGAACCCCGGGGTTTTTTCCTTGG
1._GU_144_/C
TT_________TTCC__
2._GU_144_/C
TT_________TTCC__
3._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCC_GG
4._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCCTTGG
5._GC-08-224-6-20
TTAAGGAACCCCGGGGTTTTTTCCTTGG
6._GU_144_/C
TT_________TTCC__
7._GU_144_/C
TT_________TTCC__
8._GU_144_/C
TT_________TTCC__
9._GU_144_/C
TT_________TTCC__
10._GU_144_/C
TT_________TTCC__
11._GU_144_/C
TT_________TTCC__
12._GU_144_/C
TT_________TTCC__
13._GU_144_/C
TT_________TTCC__
14._GU_144_/C
TT_________TTCC__
15._GU_144_/C
TT_________TTCC__
16._GU_144_/C
TT_________TTCC__
17._GU_144_/C
TT_________TTCC__
18._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCCTTGG
19._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCCTTGG
20._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCCTTGG
21._GC-08-223-6-19
TTAAGGAACCCCGGGGTTTTTTCCTTGG
22._GC-08-224-6-20
TTAAGGAACCCCGGGGTTTTTTCCTTGG
23._GC-08-224-6-20
TTAAGGAACCCCGGGGTTTTTTCCTTGG
24._GU_144_/C
TT_________TTCC__
25._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
26._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
27._GU_144_/C
TT_________TTCC__
28._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
29._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
30._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
31._GU_144_/C
TT_________TTCC__
32._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
33._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
34._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
35._GU_144_/C
TT_________TTCC__
36._RUQ_191
TT_________TTCC__
37._RUQ_191
__GG______CTTT_TT-
38._GU_144_/C
TT_________TTCC__
39._GU_144_/C
TT_________TTCC__
40._GU_144_/C
TT_________TTCC__
41._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
42._GC-08-224-6-20
TTAAGGAACCCCGGGGTTTTTTCCTTGG
43._GC-01-073-4-09
TTAAGGAACCCCGGGGTTTTTTCCTTGG
44._GU_144_/C
CC__________TT__
45._GU_144_/C
TT_________TTCC__
46._GC-08-223-6-19
CCAAGGAACCCCGGGGGTTT_TTTTAA
47._GC-08-224-6-20
TTAGAGAACCAAAGAGGGTTTTCCTTGG
48._GC-01-73-4-9
AA_GGAAGG_GGGGAAAGAAGGAAGG
49._GC-01-73-4-9
AA_GGAAGG_GGGGAAAGAAGGAAGG
50._RUQ_191
AA_GGAAGG_GGGGAAAGAAGGAAGG
51._MITC-000578
AA_GGAAGG_GGGGAAAGAAGGAAGG
52._MITC-000615
AA_GGAAGG_GGGGAAAGAAGGAAGG
53._GC-01-73-4-9
AA_GGAAGG_GGGGAAAGAAGGAAGG
 5758596061626364656667686970
_Input profile
CCCCCCAAGGGGAAGGGGGGAACCCCGG
1._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
2._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
3._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
4._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
5._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
6._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
7._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
8._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
9._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
10._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
11._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
12._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
13._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
14._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
15._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
16._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
17._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
18._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
19._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
20._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
21._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
22._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
23._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
24._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
25._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
26._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
27._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
28._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
29._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
30._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
31._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
32._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
33._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
34._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
35._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
36._RUQ_191
CC_CCAAGG_AAGGGGGG___AG
37._RUQ_191
CCCCCCAA_GGAAGGGGGGAA___
38._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
39._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
40._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
41._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
42._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
43._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
44._GU_144_/C
CC_CCACCG_ACAATTGG___GG
45._GU_144_/C
CC_TTACCG_CCAAGGGG___AA
46._GC-08-223-6-19
CCCTCCACCGGGACAATTGGGGTTCCGG
47._GC-08-224-6-20
CCCCTTACCGGGCCAAGGGGAGTTCCAA
48._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
49._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
50._RUQ_191
GGGGGGAAGGGGAAGGCCCCAA___
51._MITC-000578
GGGGGGAAGGGGAAGGCCCCAA___
52._MITC-000615
GGGGGGAAGGGGAAGGCCCCAA___
53._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
 7172737475767778798081828384
_Input profile
CCAAAGCCCCGGAAGGCCTTAACCCCCC
1._GU_144_/C
CC_____AAGG___CCCCCC
2._GU_144_/C
CC_____AAGG___CCCCCC
3._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
4._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
5._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
6._GU_144_/C
CC_____AAGG___CCCCCC
7._GU_144_/C
CC_____AAGG___CCCCCC
8._GU_144_/C
CC_____AAGG___CCCCCC
9._GU_144_/C
CC_____AAGG___CCCCCC
10._GU_144_/C
CC_____AAGG___CCCCCC
11._GU_144_/C
CC_____AAGG___CCCCCC
12._GU_144_/C
CC_____AAGG___CCCCCC
13._GU_144_/C
CC_____AAGG___CCCCCC
14._GU_144_/C
CC_____AAGG___CCCCCC
15._GU_144_/C
CC_____AAGG___CCCCCC
16._GU_144_/C
CC_____AAGG___CCCCCC
17._GU_144_/C
CC_____AAGG___CCCCCC
18._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
19._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
20._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
21._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
22._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
23._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
24._GU_144_/C
CC_____AAGG___CCCCCC
25._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
26._GC-01-073-4-09
CCAAAGCCCCGGAAGG_TTAACCCCCC
27._GU_144_/C
CC_____AAGG___CCCCCC
28._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
29._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
30._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
31._GU_144_/C
CC_____AAGG___CCCCCC
32._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
33._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
34._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
35._GU_144_/C
CC_____AAGG___CCCCCC
36._RUQ_191
CC_____AAGG___CCCCCC
37._RUQ_191
______AAGG__AACC__
38._GU_144_/C
CC_____AACG___CCCTCC
39._GU_144_/C
CC_____AACG___CCCTCC
40._GU_144_/C
CC_____AACG___CCCTCC
41._GC-01-073-4-09
CCAAAGCCCCGGAACGCCTTAACCCTCC
42._GC-08-224-6-20
CCAAAGCCCCGGAACGCCTTAACCCTCC
43._GC-01-073-4-09
CCAAAGCCCCGGAACGCCTTAACCCTCC
44._GU_144_/C
TT_____CCGG___TTTTTT
45._GU_144_/C
CC_____ACCC___TTCCCC
46._GC-08-223-6-19
TTCCAGCCAAAACCGGCCATAATTTTTT
47._GC-08-224-6-20
CCACAGCCCCAAACCCCCAACCTTCCCC
48._GC-01-73-4-9
GGAAAGCCCC_AACCGGTTAAGGGG_
49._GC-01-73-4-9
GGAAAGCCCC_AACCGGTTAAGGGG_
50._RUQ_191
GGAAAGCCCC_AACCGGTTAAGGGG_
51._MITC-000578
GGAAAGCCCC_AACCGGTTAAGGGG_
52._MITC-000615
GGAAAGCCCC_AACCGGTTAAGGGG_
53._GC-01-73-4-9
GGAAAGCCCC_AACGGGTTAAGGAG_
 8586878889909192      
_Input profile
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
2._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
3._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
7._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
8._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
9._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
10._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
11._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
12._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
13._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
14._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
15._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
16._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
17._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
18._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
19._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
20._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
21._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
22._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
23._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
24._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
25._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
26._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
27._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
28._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
29._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
30._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
31._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
32._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
33._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
34._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
35._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
36._RUQ_191
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
37._RUQ_191
_GGCCCCTT___X_XX_XX_XX_XX_XX_X
38._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
39._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
40._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
41._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
42._GC-08-224-6-20
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
43._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
44._GU_144_/C
_AA_CCTTCT__X_XX_XX_XX_XX_XX_X
45._GU_144_/C
_AG_TTGTCT__X_XX_XX_XX_XX_XX_X
46._GC-08-223-6-19
CCAACTCCTTCTAAGGX_XX_XX_XX_XX_XX_X
47._GC-08-224-6-20
CTAGCTTTGTCTTTGGX_XX_XX_XX_XX_XX_X
48._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
49._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
50._RUQ_191
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
51._MITC-000578
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
52._MITC-000615
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
53._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-08-224-6-20

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

1._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

2._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

3._GU_144_/C GC-08-223-6-19

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

4._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

5._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

7._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

8._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

9._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

10._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

11._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

12._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

13._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

14._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

15._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

16._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

17._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

18._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

19._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

20._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

21._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

22._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

23._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

24._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

25._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

26._GU_144_/C GC-01-073-4-09

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

27._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

28._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

29._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

30._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

31._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

32._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

33._GU_144_/C GC-01-073-4-09

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

34._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

35._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

36._GU_144_/C RUQ_191

98.7 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

94 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

39._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

40._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

41._GU_144_/C GC-01-073-4-09

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

42._GU_144_/C GC-08-224-6-20

92.9 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

43._GU_144_/C GC-01-073-4-09

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

44._GU_144_/C

50 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

45._GU_144_/C

51.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

46._GU_144_/C GC-08-223-6-19

63.2 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

47._GU_144_/C GC-08-224-6-20

58.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

48._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C RUQ_191

47.4 %
78 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_144_/C MITC-000578

47.4 %
78 shared markers

USDA-SHRS, United States of America
 Mars, 2018

52._GU_144_/C MITC-000615

47.4 %
78 shared markers

USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C GC-01-73-4-9

43.6 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP561 40TcSNP894
41TcSNP1063 42TcSNP1126 43TcSNP1270 44TcSNP606 45TcSNP329
46TcSNP689 47TcSNP944 48TcSNP1242 49TcSNP1383 50TcSNP547
51TcSNP776 52TcSNP1309 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240