SNP Profiles of GU-144C   View Data

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 Key

 1234567891011121314
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GU_144_/C
AACCCC____CCCCGG_CC__
3._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GU_144_/C
AACCCC____CCCCGG_CC__
8._GU_144_/C
AACCCC____CCCCGG_CC__
9._GU_144_/C
AACCCC____CCCCGG_CC__
10._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
11._GU_144_/C
AACCCC____CCCCGG_CC__
12._GU_144_/C
AACCCC____CCCCGG_CC__
13._GU_144_/C
AACCCC____CCCCGG_CC__
14._GU_144_/C
AACCCC____CCCCGG_CC__
15._GU_144_/C
AACCCC____CCCCGG_CC__
16._GU_144_/C
AACCCC____CCCCGG_CC__
17._GU_144_/C
AACCCC____CCCCGG_CC__
18._GU_144_/C
AACCCC____CCCCGG_CC__
19._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
20._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
21._GU_144_/C
AACCCC____CCCCGG_CC__
22._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
23._GU_144_/C
AACCCC____CCCCGG_CC__
24._GU_144_/C
AACCCC____CCCCGG_CC__
25._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
26._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
27._GU_144_/C
AACCCC____CCCCGG_CC__
28._GU_144_/C
AACCCC____CCCCGG_CC__
29._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
30._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
31._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
32._GU_144_/C
AACCCC____CCCCGG_CC__
33._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
34._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
35._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
36._RUQ_191
AACCCC____CCCCGG_CC__
37._RUQ_191
_CCCC__CC_CC__TTCC__
38._GU_144_/C
AACCAC____CCCCGG_CC__
39._GU_144_/C
AACCAC____CCCCGG_CC__
40._GU_144_/C
AACCAC____CCCCGG_CC__
41._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
42._GC-08-224-6-20
AACCACGGGGCTCCCCCCGGTTCCTTAA
43._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
44._GU_144_/C
ATTTAC____CCCCGG_CC__
45._GU_144_/C
ATCTAC____CCCTAG_CT__
46._GC-08-223-6-19
ATTTACAGAGCTCTCCCCGGTTCCCTAA
47._GC-08-224-6-20
ATCTACAGAGCTCTCCCTAGTTCTTTAT
48._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
49._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
50._RUQ_191
AA_CCGGGG_GGGG_GGAAGGAATT
51._MITC-000578
AA_CCGGGG_GGGG_GGAAGGAATT
52._MITC-000615
AA_CCGGGG_GGGG_GGAAGGAATT
53._GC-01-73-4-9
AA_ACGGGG_GGGG_GGAAGGAATT
 1516171819202122232425262728
_Input profile
CCGGGGCCGGCTAATTGGAAAACCGGAA
1._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
2._GU_144_/C
_GG__GG____AAAA_GGAA
3._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
4._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
5._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
6._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
7._GU_144_/C
_GG__GG____AAAA_GGAA
8._GU_144_/C
_GG__GG____AAAA_GGAA
9._GU_144_/C
_GG__GG____AAAA_GGAA
10._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
11._GU_144_/C
_GG__GG____AAAA_GGAA
12._GU_144_/C
_GG__GG____AAAA_GGAA
13._GU_144_/C
_GG__GG____AAAA_GGAA
14._GU_144_/C
_GG__GG____AAAA_GGAA
15._GU_144_/C
_GG__GG____AAAA_GGAA
16._GU_144_/C
_GG__GG____AAAA_GGAA
17._GU_144_/C
_GG__GG____AAAA_GGAA
18._GU_144_/C
_GG__GG____AAAA_GGAA
19._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
20._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
21._GU_144_/C
_GG__GG____AAAA_GGAA
22._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
23._GU_144_/C
_GG__GG____AAAA_GGAA
24._GU_144_/C
_GG__GG____AAAA_GGAA
25._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
26._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
27._GU_144_/C
_GG__GG____AAAA_GGAA
28._GU_144_/C
_GG__GG____AAAA_GGAA
29._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
30._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
31._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
32._GU_144_/C
_GG__GG____AAAA_GGAA
33._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
34._GC-01-073-4-09
CCGGGGCCGGCTAA_GGAAAACCGGAA
35._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
36._RUQ_191
_GG__GG____AAAA_GGAA
37._RUQ_191
___CC____GG_AACCGG_
38._GU_144_/C
_GG__GG____TTAA_GGAA
39._GU_144_/C
_GG__GG____TTAA_GGAA
40._GU_144_/C
_GG__GG____TTAA_GGAA
41._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
42._GC-08-224-6-20
CCGGGG_GGTTAATTGGTTAACCGGAA
43._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
44._GU_144_/C
_AA__CC____ATAA_GGAA
45._GU_144_/C
_GG__CG____ATAA_CCAT
46._GC-08-223-6-19
CCAACGCCCCCCAATTGGATAACGGGAA
47._GC-08-224-6-20
AAGGCGCGCGCTAACTGGATAACGCCAT
48._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
49._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
50._RUQ_191
CCGGCC_GGAGGGAAGGAAAAGGCCAA
51._MITC-000578
CCGGCC_GGAGGGAAGGAAAAGGCCAA
52._MITC-000615
CCGGCC_GGAGGGAAGGAAAAGGCCAA
53._GC-01-73-4-9
CCGGCC_GGAAGGAAGGTTAAGGCCAA
 2930313233343536373839404142
_Input profile
TTTTGGCCCCAATTGGGGGGCCAGCCGG
1._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGG_AGCCGG
2._GU_144_/C
___CC_AATT__GG____
3._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
4._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
5._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
6._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
7._GU_144_/C
___CC_AATT__GG____
8._GU_144_/C
___CC_AATT__GG____
9._GU_144_/C
___CC_AATT__GG____
10._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
11._GU_144_/C
___CC_AATT__GG____
12._GU_144_/C
___CC_AATT__GG____
13._GU_144_/C
___CC_AATT__GG____
14._GU_144_/C
___CC_AATT__GG____
15._GU_144_/C
___CC_AATT__GG____
16._GU_144_/C
___CC_AATT__GG____
17._GU_144_/C
___CC_AATT__GG____
18._GU_144_/C
___CC_AATT__GG____
19._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
20._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
21._GU_144_/C
___CC_AATT__GG____
22._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
23._GU_144_/C
___CC_AATT__GG____
24._GU_144_/C
___CC_AATT__GG____
25._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
26._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
27._GU_144_/C
___CC_AATT__GG____
28._GU_144_/C
___CC_AATT__GG____
29._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
30._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
31._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
32._GU_144_/C
___CC_AATT__GG____
33._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
34._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
35._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
36._RUQ_191
___CC_AATT__GG____
37._RUQ_191
__GGCCCCAATT__GGCC__GG
38._GU_144_/C
___CC_GGTT__GG____
39._GU_144_/C
___CC_GGTT__GG____
40._GU_144_/C
___CC_GGTT__GG____
41._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
42._GC-08-224-6-20
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
43._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
44._GU_144_/C
___CC_GGGT__AA____
45._GU_144_/C
___GG_AGGG__AA____
46._GC-08-223-6-19
TTGTGGCCCCGGGTGTTTAACTAGCCGG
47._GC-08-224-6-20
TTGTGGGGCCAGGGGTTTAACCGGCCGG
48._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
49._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
50._RUQ_191
AAAAGGCCCCAAAACCCCGGGGAGGGCC
51._MITC-000578
AAAAGGCCCCAAAACCCCGGGGAGGGCC
52._MITC-000615
AAAAGGCCCCAAAACCCCGGGGAGGGCC
53._GC-01-73-4-9
AAAAGGCCCCGGAACCCCGGGGGGGGCC
 4344454647484950515253545556
_Input profile
TTTTAAGGAACCCCGGGGTTTTTTCCTT
1._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
2._GU_144_/C
_TT_________TTCC_
3._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
4._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCC_
5._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
6._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
7._GU_144_/C
_TT_________TTCC_
8._GU_144_/C
_TT_________TTCC_
9._GU_144_/C
_TT_________TTCC_
10._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
11._GU_144_/C
_TT_________TTCC_
12._GU_144_/C
_TT_________TTCC_
13._GU_144_/C
_TT_________TTCC_
14._GU_144_/C
_TT_________TTCC_
15._GU_144_/C
_TT_________TTCC_
16._GU_144_/C
_TT_________TTCC_
17._GU_144_/C
_TT_________TTCC_
18._GU_144_/C
_TT_________TTCC_
19._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
20._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCTT
21._GU_144_/C
_TT_________TTCC_
22._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
23._GU_144_/C
_TT_________TTCC_
24._GU_144_/C
_TT_________TTCC_
25._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
26._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
27._GU_144_/C
_TT_________TTCC_
28._GU_144_/C
_TT_________TTCC_
29._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
30._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
31._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
32._GU_144_/C
_TT_________TTCC_
33._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
34._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
35._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
36._RUQ_191
_TT_________TTCC_
37._RUQ_191
TT__GG______CTTT_TT
38._GU_144_/C
_TT_________TTCC_
39._GU_144_/C
_TT_________TTCC_
40._GU_144_/C
_TT_________TTCC_
41._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
42._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCTT
43._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCTT
44._GU_144_/C
_CC__________TT_
45._GU_144_/C
_TT_________TTCC_
46._GC-08-223-6-19
TTCCAAGGAACCCCGGGGGTTT_TTTT
47._GC-08-224-6-20
TTTTAGAGAACCAAAGAGGGTTTTCCTT
48._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGAA
49._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGAA
50._RUQ_191
_AA_GGAAGG_GGGGAAAGAAGGAA
51._MITC-000578
_AA_GGAAGG_GGGGAAAGAAGGAA
52._MITC-000615
_AA_GGAAGG_GGGGAAAGAAGGAA
53._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGAA
 5758596061626364656667686970
_Input profile
GGCCCCCCAAGGGGAAGGGGGGAACCCC
1._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
2._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
3._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
4._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
5._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
6._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
7._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
8._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
9._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
10._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
11._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
12._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
13._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
14._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
15._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
16._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
17._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
18._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
19._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
20._GC-08-223-6-19
GGCCCCCCAAGGGGAAGGGGGGAACCCC
21._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
22._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
23._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
24._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
25._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
26._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
27._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
28._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
29._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
30._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
31._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
32._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
33._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
34._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
35._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
36._RUQ_191
_CC_CCAAGG_AAGGGGGG___
37._RUQ_191
-CCCCCCAA_GGAAGGGGGGAA__
38._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
39._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
40._GU_144_/C
_CC_CCAAGG_AAGGGGGG___
41._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
42._GC-08-224-6-20
GGCCCCCCAAGGGGAAGGGGGGAACCCC
43._GC-01-073-4-09
GGCCCCCCAAGGGGAAGGGGGGAACCCC
44._GU_144_/C
_CC_CCACCG_ACAATTGG___
45._GU_144_/C
_CC_TTACCG_CCAAGGGG___
46._GC-08-223-6-19
AACCCTCCACCGGGACAATTGGGGTTCC
47._GC-08-224-6-20
GGCCCCTTACCGGGCCAAGGGGAGTTCC
48._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA__
49._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA__
50._RUQ_191
GGGGGGGGAAGGGGAAGGCCCCAA__
51._MITC-000578
GGGGGGGGAAGGGGAAGGCCCCAA__
52._MITC-000615
GGGGGGGGAAGGGGAAGGCCCCAA__
53._GC-01-73-4-9
GGGGGGGGAAGGGGAAGGCCCCAA__
 7172737475767778798081828384
_Input profile
GGCCAAAGCCCCGGAAGGCCTTAACCCC
1._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGCCTTAACCCC
2._GU_144_/C
GGCC_____AAGG___CCCC
3._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
4._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
5._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
6._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGCCTTAACCCC
7._GU_144_/C
GGCC_____AAGG___CCCC
8._GU_144_/C
GGCC_____AAGG___CCCC
9._GU_144_/C
GGCC_____AAGG___CCCC
10._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
11._GU_144_/C
GGCC_____AAGG___CCCC
12._GU_144_/C
GGCC_____AAGG___CCCC
13._GU_144_/C
GGCC_____AAGG___CCCC
14._GU_144_/C
GGCC_____AAGG___CCCC
15._GU_144_/C
GGCC_____AAGG___CCCC
16._GU_144_/C
GGCC_____AAGG___CCCC
17._GU_144_/C
GGCC_____AAGG___CCCC
18._GU_144_/C
GGCC_____AAGG___CCCC
19._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
20._GC-08-223-6-19
GGCCAAAGCCCCGGAAGGCCTTAACCCC
21._GU_144_/C
GGCC_____AAGG___CCCC
22._GC-08-224-6-20
GGCCAAAGCCCCGGAAGGCCTTAACCCC
23._GU_144_/C
GGCC_____AAGG___CCCC
24._GU_144_/C
GGCC_____AAGG___CCCC
25._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
26._GC-01-073-4-09
GGCCAAAGCCCCGGAAGG_TTAACCCC
27._GU_144_/C
GGCC_____AAGG___CCCC
28._GU_144_/C
GGCC_____AAGG___CCCC
29._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
30._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
31._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
32._GU_144_/C
GGCC_____AAGG___CCCC
33._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
34._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
35._GC-01-073-4-09
GGCCAAAGCCCCGGAAGGCCTTAACCCC
36._RUQ_191
AGCC_____AAGG___CCCC
37._RUQ_191
_______AAGG__AACC_
38._GU_144_/C
GGCC_____AACG___CCCT
39._GU_144_/C
GGCC_____AACG___CCCT
40._GU_144_/C
GGCC_____AACG___CCCT
41._GC-01-073-4-09
GGCCAAAGCCCCGGAACGCCTTAACCCT
42._GC-08-224-6-20
GGCCAAAGCCCCGGAACGCCTTAACCCT
43._GC-01-073-4-09
GGCCAAAGCCCCGGAACGCCTTAACCCT
44._GU_144_/C
GGTT_____CCGG___TTTT
45._GU_144_/C
AACC_____ACCC___TTCC
46._GC-08-223-6-19
GGTTCCAGCCAAAACCGGCCATAATTTT
47._GC-08-224-6-20
AACCACAGCCCCAAACCCCCAACCTTCC
48._GC-01-73-4-9
_GGAAAGCCCC_AACCGGTTAAGGGG
49._GC-01-73-4-9
_GGAAAGCCCC_AACCGGTTAAGGGG
50._RUQ_191
_GGAAAGCCCC_AACCGGTTAAGGGG
51._MITC-000578
_GGAAAGCCCC_AACCGGTTAAGGGG
52._MITC-000615
_GGAAAGCCCC_AACCGGTTAAGGGG
53._GC-01-73-4-9
_GGAAAGCCCC_AACGGGTTAAGGAG
 858687888990919293     
_Input profile
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
1._GC-08-224-6-20
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
2._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
3._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
4._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
5._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
6._GC-08-224-6-20
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
7._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
8._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
9._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
10._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
11._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
12._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
13._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
14._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
15._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
16._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
17._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
18._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
19._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
20._GC-08-223-6-19
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
21._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
22._GC-08-224-6-20
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
23._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
24._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
25._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
26._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
27._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
28._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
29._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
30._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
31._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
32._GU_144_/C
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
33._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
34._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
35._GC-01-073-4-09
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
36._RUQ_191
CC_GG_CCTTTT__X_XX_XX_XX_XX_X
37._RUQ_191
__GGCCCCTT___X_XX_XX_XX_XX_X
38._GU_144_/C
CC_AG_CCTTTT__X_XX_XX_XX_XX_X
39._GU_144_/C
CC_AG_CCTTTT__X_XX_XX_XX_XX_X
40._GU_144_/C
CC_AG_CCTTTT__X_XX_XX_XX_XX_X
41._GC-01-073-4-09
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
42._GC-08-224-6-20
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
43._GC-01-073-4-09
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
44._GU_144_/C
TT_AA_CCTTCT__X_XX_XX_XX_XX_X
45._GU_144_/C
CC_AG_TTGTCT__X_XX_XX_XX_XX_X
46._GC-08-223-6-19
TTCCAACTCCTTCTAAGGX_XX_XX_XX_XX_X
47._GC-08-224-6-20
CCCTAGCTTTGTCTTTGGX_XX_XX_XX_XX_X
48._GC-01-73-4-9
_GG__GGAAAATTGGX_XX_XX_XX_XX_X
49._GC-01-73-4-9
_GG__GGAAAATTGGX_XX_XX_XX_XX_X
50._RUQ_191
_GG__GGAAAATTGGX_XX_XX_XX_XX_X
51._MITC-000578
_GG__GGAAAATTGGX_XX_XX_XX_XX_X
52._MITC-000615
_GG__GGAAAATTGGX_XX_XX_XX_XX_X
53._GC-01-73-4-9
_GG__GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-08-224-6-20

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

1._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

2._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

3._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

6._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

8._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

9._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

10._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

11._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

12._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

13._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

14._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

15._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

16._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

17._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

18._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

19._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

20._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

21._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

22._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

23._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

24._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

25._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

26._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

27._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

28._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

29._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

30._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

31._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

32._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

33._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

34._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

35._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

36._GU_144_/C RUQ_191

98.7 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

94.2 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

39._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

40._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

41._GU_144_/C GC-01-073-4-09

93 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

42._GU_144_/C GC-08-224-6-20

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

43._GU_144_/C GC-01-073-4-09

93 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

44._GU_144_/C

50 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

45._GU_144_/C

51.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

46._GU_144_/C GC-08-223-6-19

63 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

47._GU_144_/C GC-08-224-6-20

58.6 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

48._GU_144_/C GC-01-73-4-9

46.8 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._GU_144_/C GC-01-73-4-9

46.8 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C RUQ_191

46.8 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_144_/C MITC-000578

46.8 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

52._GU_144_/C MITC-000615

46.8 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C GC-01-73-4-9

43 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240