SNP Profiles of GU 144 /C   View Data

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 Key

 1234567891011121314
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GU_144_/C
AACCCC____CCCCGG_CC__
3._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GU_144_/C
AACCCC____CCCCGG_CC__
8._GU_144_/C
AACCCC____CCCCGG_CC__
9._GU_144_/C
AACCCC____CCCCGG_CC__
10._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
11._GU_144_/C
AACCCC____CCCCGG_CC__
12._GU_144_/C
AACCCC____CCCCGG_CC__
13._GU_144_/C
AACCCC____CCCCGG_CC__
14._GU_144_/C
AACCCC____CCCCGG_CC__
15._GU_144_/C
AACCCC____CCCCGG_CC__
16._GU_144_/C
AACCCC____CCCCGG_CC__
17._GU_144_/C
AACCCC____CCCCGG_CC__
18._GU_144_/C
AACCCC____CCCCGG_CC__
19._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
20._GC-08-223-6-19
AACCCCGGGGTTCCCCCCGGTTCCTTAA
21._GU_144_/C
AACCCC____CCCCGG_CC__
22._GC-08-224-6-20
AACCCCGGGGTTCCCCCCGGTTCCTTAA
23._GU_144_/C
AACCCC____CCCCGG_CC__
24._GU_144_/C
AACCCC____CCCCGG_CC__
25._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
26._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
27._GU_144_/C
AACCCC____CCCCGG_CC__
28._GU_144_/C
AACCCC____CCCCGG_CC__
29._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
30._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
31._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
32._GU_144_/C
AACCCC____CCCCGG_CC__
33._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
34._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
35._GC-01-073-4-09
AACCCCGGGGTTCCCCCCGGTTCCTTAA
36._RUQ_191
AACCCC____CCCCGG_CC__
37._RUQ_191
_CCCC__CC_CC__TTCC__
38._GU_144_/C
AACCAC____CCCCGG_CC__
39._GU_144_/C
AACCAC____CCCCGG_CC__
40._GU_144_/C
AACCAC____CCCCGG_CC__
41._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
42._GC-08-224-6-20
AACCACGGGGCTCCCCCCGGTTCCTTAA
43._GC-01-073-4-09
AACCACGGGGCTCCCCCCGGTTCCTTAA
44._GU_144_/C
ATTTAC____CCCCGG_CC__
45._GU_144_/C
ATCTAC____CCCTAG_CT__
46._GC-08-223-6-19
ATTTACAGAGCTCTCCCCGGTTCCCTAA
47._GC-08-224-6-20
ATCTACAGAGCTCTCCCTAGTTCTTTAT
48._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
49._GC-01-73-4-9
AA_CCGGGG_GGGG_GGAAGGAATT
50._RUQ_191
AA_CCGGGG_GGGG_GGAAGGAATT
51._MITC-000578
AA_CCGGGG_GGGG_GGAAGGAATT
52._MITC-000615
AA_CCGGGG_GGGG_GGAAGGAATT
53._GC-01-73-4-9
AA_ACGGGG_GGGG_GGAAGGAATT
 1516171819202122232425262728
_Input profile
CCGGGGCCGGCTAATTGGAAAACCGGAA
1._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
2._GU_144_/C
_GG__GG____AAAA_GGAA
3._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
4._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
5._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
6._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
7._GU_144_/C
_GG__GG____AAAA_GGAA
8._GU_144_/C
_GG__GG____AAAA_GGAA
9._GU_144_/C
_GG__GG____AAAA_GGAA
10._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
11._GU_144_/C
_GG__GG____AAAA_GGAA
12._GU_144_/C
_GG__GG____AAAA_GGAA
13._GU_144_/C
_GG__GG____AAAA_GGAA
14._GU_144_/C
_GG__GG____AAAA_GGAA
15._GU_144_/C
_GG__GG____AAAA_GGAA
16._GU_144_/C
_GG__GG____AAAA_GGAA
17._GU_144_/C
_GG__GG____AAAA_GGAA
18._GU_144_/C
_GG__GG____AAAA_GGAA
19._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
20._GC-08-223-6-19
CCGGGGCCGGCTAATTGGAAAACCGGAA
21._GU_144_/C
_GG__GG____AAAA_GGAA
22._GC-08-224-6-20
CCGGGGCCGGCTAATTGGAAAACCGGAA
23._GU_144_/C
_GG__GG____AAAA_GGAA
24._GU_144_/C
_GG__GG____AAAA_GGAA
25._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
26._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
27._GU_144_/C
_GG__GG____AAAA_GGAA
28._GU_144_/C
_GG__GG____AAAA_GGAA
29._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
30._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
31._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
32._GU_144_/C
_GG__GG____AAAA_GGAA
33._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
34._GC-01-073-4-09
CCGGGGCCGGCTAA_GGAAAACCGGAA
35._GC-01-073-4-09
CCGGGGCCGGCTAATTGGAAAACCGGAA
36._RUQ_191
_GG__GG____AAAA_GGAA
37._RUQ_191
___CC____GG_AACCGG_
38._GU_144_/C
_GG__GG____TTAA_GGAA
39._GU_144_/C
_GG__GG____TTAA_GGAA
40._GU_144_/C
_GG__GG____TTAA_GGAA
41._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
42._GC-08-224-6-20
CCGGGG_GGTTAATTGGTTAACCGGAA
43._GC-01-073-4-09
CCGGGGCCGGTTAATTGGTTAACCGGAA
44._GU_144_/C
_AA__CC____ATAA_GGAA
45._GU_144_/C
_GG__CG____ATAA_CCAT
46._GC-08-223-6-19
CCAACGCCCCCCAATTGGATAACGGGAA
47._GC-08-224-6-20
AAGGCGCGCGCTAACTGGATAACGCCAT
48._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
49._GC-01-73-4-9
CCGGCC_GGAGGGAAGGAAAAGGCCAA
50._RUQ_191
CCGGCC_GGAGGGAAGGAAAAGGCCAA
51._MITC-000578
CCGGCC_GGAGGGAAGGAAAAGGCCAA
52._MITC-000615
CCGGCC_GGAGGGAAGGAAAAGGCCAA
53._GC-01-73-4-9
CCGGCC_GGAAGGAAGGTTAAGGCCAA
 2930313233343536373839404142
_Input profile
TTTTGGCCCCAATTGGGGGGCCAGCCGG
1._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGG_AGCCGG
2._GU_144_/C
___CC_AATT__GG____
3._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
4._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
5._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
6._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
7._GU_144_/C
___CC_AATT__GG____
8._GU_144_/C
___CC_AATT__GG____
9._GU_144_/C
___CC_AATT__GG____
10._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
11._GU_144_/C
___CC_AATT__GG____
12._GU_144_/C
___CC_AATT__GG____
13._GU_144_/C
___CC_AATT__GG____
14._GU_144_/C
___CC_AATT__GG____
15._GU_144_/C
___CC_AATT__GG____
16._GU_144_/C
___CC_AATT__GG____
17._GU_144_/C
___CC_AATT__GG____
18._GU_144_/C
___CC_AATT__GG____
19._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
20._GC-08-223-6-19
TTTTGGCCCCAATTGGGGGGCCAGCCGG
21._GU_144_/C
___CC_AATT__GG____
22._GC-08-224-6-20
TTTTGGCCCCAATTGGGGGGCCAGCCGG
23._GU_144_/C
___CC_AATT__GG____
24._GU_144_/C
___CC_AATT__GG____
25._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
26._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
27._GU_144_/C
___CC_AATT__GG____
28._GU_144_/C
___CC_AATT__GG____
29._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
30._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
31._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
32._GU_144_/C
___CC_AATT__GG____
33._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
34._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
35._GC-01-073-4-09
TTTTGGCCCCAATTGGGGGGCCAGCCGG
36._RUQ_191
___CC_AATT__GG____
37._RUQ_191
__GGCCCCAATT__GGCC__GG
38._GU_144_/C
___CC_GGTT__GG____
39._GU_144_/C
___CC_GGTT__GG____
40._GU_144_/C
___CC_GGTT__GG____
41._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
42._GC-08-224-6-20
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
43._GC-01-073-4-09
TTTTGGCCCCGGTTGGGGGGCCGGCCGG
44._GU_144_/C
___CC_GGGT__AA____
45._GU_144_/C
___GG_AGGG__AA____
46._GC-08-223-6-19
TTGTGGCCCCGGGTGTTTAACTAGCCGG
47._GC-08-224-6-20
TTGTGGGGCCAGGGGTTTAACCGGCCGG
48._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
49._GC-01-73-4-9
AAAAGGCCCCAAAACCCCGGGGAGGGCC
50._RUQ_191
AAAAGGCCCCAAAACCCCGGGGAGGGCC
51._MITC-000578
AAAAGGCCCCAAAACCCCGGGGAGGGCC
52._MITC-000615
AAAAGGCCCCAAAACCCCGGGGAGGGCC
53._GC-01-73-4-9
AAAAGGCCCCGGAACCCCGGGGGGGGCC
 4344454647484950515253545556
_Input profile
TTTTAAGGAACCCCGGGGTTTTTTCCGG
1._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCGG
2._GU_144_/C
_TT_________TTCC_
3._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCGG
4._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCGG
5._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCGG
6._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCGG
7._GU_144_/C
_TT_________TTCC_
8._GU_144_/C
_TT_________TTCC_
9._GU_144_/C
_TT_________TTCC_
10._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCGG
11._GU_144_/C
_TT_________TTCC_
12._GU_144_/C
_TT_________TTCC_
13._GU_144_/C
_TT_________TTCC_
14._GU_144_/C
_TT_________TTCC_
15._GU_144_/C
_TT_________TTCC_
16._GU_144_/C
_TT_________TTCC_
17._GU_144_/C
_TT_________TTCC_
18._GU_144_/C
_TT_________TTCC_
19._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCGG
20._GC-08-223-6-19
TTTTAAGGAACCCCGGGGTTTTTTCCGG
21._GU_144_/C
_TT_________TTCC_
22._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCGG
23._GU_144_/C
_TT_________TTCC_
24._GU_144_/C
_TT_________TTCC_
25._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
26._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
27._GU_144_/C
_TT_________TTCC_
28._GU_144_/C
_TT_________TTCC_
29._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
30._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
31._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
32._GU_144_/C
_TT_________TTCC_
33._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
34._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
35._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
36._RUQ_191
_TT_________TTCC_
37._RUQ_191
TT__GG______CTTT_-
38._GU_144_/C
_TT_________TTCC_
39._GU_144_/C
_TT_________TTCC_
40._GU_144_/C
_TT_________TTCC_
41._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
42._GC-08-224-6-20
TTTTAAGGAACCCCGGGGTTTTTTCCGG
43._GC-01-073-4-09
TTTTAAGGAACCCCGGGGTTTTTTCCGG
44._GU_144_/C
_CC__________TT_
45._GU_144_/C
_TT_________TTCC_
46._GC-08-223-6-19
TTCCAAGGAACCCCGGGGGTTT_TTAA
47._GC-08-224-6-20
TTTTAGAGAACCAAAGAGGGTTTTCCGG
48._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGGG
49._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGGG
50._RUQ_191
_AA_GGAAGG_GGGGAAAGAAGGGG
51._MITC-000578
_AA_GGAAGG_GGGGAAAGAAGGGG
52._MITC-000615
_AA_GGAAGG_GGGGAAAGAAGGGG
53._GC-01-73-4-9
_AA_GGAAGG_GGGGAAAGAAGGGG
 5758596061626364656667686970
_Input profile
CCCCCCAAGGGGAAGGGGGGAACCCCGG
1._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
2._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
3._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
4._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
5._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
6._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
7._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
8._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
9._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
10._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
11._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
12._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
13._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
14._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
15._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
16._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
17._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
18._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
19._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
20._GC-08-223-6-19
CCCCCCAAGGGGAAGGGGGGAACCCCGG
21._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
22._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
23._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
24._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
25._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
26._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
27._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
28._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
29._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
30._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
31._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
32._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
33._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
34._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
35._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
36._RUQ_191
CC_CCAAGG_AAGGGGGG___AG
37._RUQ_191
CCCCCCAA_GGAAGGGGGGAA___
38._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
39._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
40._GU_144_/C
CC_CCAAGG_AAGGGGGG___GG
41._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
42._GC-08-224-6-20
CCCCCCAAGGGGAAGGGGGGAACCCCGG
43._GC-01-073-4-09
CCCCCCAAGGGGAAGGGGGGAACCCCGG
44._GU_144_/C
CC_CCACCG_ACAATTGG___GG
45._GU_144_/C
CC_TTACCG_CCAAGGGG___AA
46._GC-08-223-6-19
CCCTCCACCGGGACAATTGGGGTTCCGG
47._GC-08-224-6-20
CCCCTTACCGGGCCAAGGGGAGTTCCAA
48._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
49._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
50._RUQ_191
GGGGGGAAGGGGAAGGCCCCAA___
51._MITC-000578
GGGGGGAAGGGGAAGGCCCCAA___
52._MITC-000615
GGGGGGAAGGGGAAGGCCCCAA___
53._GC-01-73-4-9
GGGGGGAAGGGGAAGGCCCCAA___
 7172737475767778798081828384
_Input profile
CCAAAGCCCCGGAAGGCCTTAACCCCCC
1._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
2._GU_144_/C
CC_____AAGG___CCCCCC
3._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
4._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
5._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
6._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
7._GU_144_/C
CC_____AAGG___CCCCCC
8._GU_144_/C
CC_____AAGG___CCCCCC
9._GU_144_/C
CC_____AAGG___CCCCCC
10._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
11._GU_144_/C
CC_____AAGG___CCCCCC
12._GU_144_/C
CC_____AAGG___CCCCCC
13._GU_144_/C
CC_____AAGG___CCCCCC
14._GU_144_/C
CC_____AAGG___CCCCCC
15._GU_144_/C
CC_____AAGG___CCCCCC
16._GU_144_/C
CC_____AAGG___CCCCCC
17._GU_144_/C
CC_____AAGG___CCCCCC
18._GU_144_/C
CC_____AAGG___CCCCCC
19._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
20._GC-08-223-6-19
CCAAAGCCCCGGAAGGCCTTAACCCCCC
21._GU_144_/C
CC_____AAGG___CCCCCC
22._GC-08-224-6-20
CCAAAGCCCCGGAAGGCCTTAACCCCCC
23._GU_144_/C
CC_____AAGG___CCCCCC
24._GU_144_/C
CC_____AAGG___CCCCCC
25._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
26._GC-01-073-4-09
CCAAAGCCCCGGAAGG_TTAACCCCCC
27._GU_144_/C
CC_____AAGG___CCCCCC
28._GU_144_/C
CC_____AAGG___CCCCCC
29._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
30._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
31._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
32._GU_144_/C
CC_____AAGG___CCCCCC
33._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
34._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
35._GC-01-073-4-09
CCAAAGCCCCGGAAGGCCTTAACCCCCC
36._RUQ_191
CC_____AAGG___CCCCCC
37._RUQ_191
______AAGG__AACC__
38._GU_144_/C
CC_____AACG___CCCTCC
39._GU_144_/C
CC_____AACG___CCCTCC
40._GU_144_/C
CC_____AACG___CCCTCC
41._GC-01-073-4-09
CCAAAGCCCCGGAACGCCTTAACCCTCC
42._GC-08-224-6-20
CCAAAGCCCCGGAACGCCTTAACCCTCC
43._GC-01-073-4-09
CCAAAGCCCCGGAACGCCTTAACCCTCC
44._GU_144_/C
TT_____CCGG___TTTTTT
45._GU_144_/C
CC_____ACCC___TTCCCC
46._GC-08-223-6-19
TTCCAGCCAAAACCGGCCATAATTTTTT
47._GC-08-224-6-20
CCACAGCCCCAAACCCCCAACCTTCCCC
48._GC-01-73-4-9
GGAAAGCCCC_AACCGGTTAAGGGG_
49._GC-01-73-4-9
GGAAAGCCCC_AACCGGTTAAGGGG_
50._RUQ_191
GGAAAGCCCC_AACCGGTTAAGGGG_
51._MITC-000578
GGAAAGCCCC_AACCGGTTAAGGGG_
52._MITC-000615
GGAAAGCCCC_AACCGGTTAAGGGG_
53._GC-01-73-4-9
GGAAAGCCCC_AACGGGTTAAGGAG_
 8586878889909192      
_Input profile
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
2._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
3._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
7._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
8._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
9._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
10._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
11._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
12._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
13._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
14._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
15._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
16._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
17._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
18._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
19._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
20._GC-08-223-6-19
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
21._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
22._GC-08-224-6-20
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
23._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
24._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
25._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
26._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
27._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
28._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
29._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
30._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
31._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
32._GU_144_/C
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
33._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
34._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
35._GC-01-073-4-09
CCGGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
36._RUQ_191
_GG_CCTTTT__X_XX_XX_XX_XX_XX_X
37._RUQ_191
_GGCCCCTT___X_XX_XX_XX_XX_XX_X
38._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
39._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
40._GU_144_/C
_AG_CCTTTT__X_XX_XX_XX_XX_XX_X
41._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
42._GC-08-224-6-20
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
43._GC-01-073-4-09
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
44._GU_144_/C
_AA_CCTTCT__X_XX_XX_XX_XX_XX_X
45._GU_144_/C
_AG_TTGTCT__X_XX_XX_XX_XX_XX_X
46._GC-08-223-6-19
CCAACTCCTTCTAAGGX_XX_XX_XX_XX_XX_X
47._GC-08-224-6-20
CTAGCTTTGTCTTTGGX_XX_XX_XX_XX_XX_X
48._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
49._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
50._RUQ_191
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
51._MITC-000578
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
52._MITC-000615
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X
53._GC-01-73-4-9
GG__GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-08-223-6-19

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._GU_144_/C GC-08-224-6-20

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

2._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

3._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

5._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

8._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

9._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

10._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

11._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

12._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

13._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

14._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

15._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

16._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

17._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

18._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

19._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

20._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

21._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

22._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

23._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

24._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

25._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

26._GU_144_/C GC-01-073-4-09

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

27._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

28._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

29._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

30._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

31._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

32._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

33._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

34._GU_144_/C GC-01-073-4-09

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

35._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

36._GU_144_/C RUQ_191

98.7 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

94 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

39._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

40._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

41._GU_144_/C GC-01-073-4-09

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

42._GU_144_/C GC-08-224-6-20

92.9 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

43._GU_144_/C GC-01-073-4-09

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

44._GU_144_/C

50 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

45._GU_144_/C

51.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

46._GU_144_/C GC-08-223-6-19

62.6 %
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

47._GU_144_/C GC-08-224-6-20

58.2 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

48._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._GU_144_/C GC-01-73-4-9

47.4 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C RUQ_191

47.4 %
78 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_144_/C MITC-000578

47.4 %
78 shared markers

USDA-SHRS, United States of America
 Mars, 2018

52._GU_144_/C MITC-000615

47.4 %
78 shared markers

USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C GC-01-73-4-9

43.6 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP1309 54TcSNP151 55TcSNP1520
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240