SNP Profiles of SCA-11   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
1._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
2._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
3._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
4._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
5._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
6._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
7._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
8._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
9._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
10._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
11._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
12._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
13._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
14._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
15._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
16._GC-08-157-3-56
AT_CCCCAGAGTTTTCCTTAGTTTTTT
17._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTT_TT
18._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
19._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
20._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTT_TTTTTT
21._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
22._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
23._GC-08-157-3-56
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
24._GC-08-157-3-56
ATCCCCCCAG_TTTTCCTTAGTTTTTT
25._GC-01-117-6-14
ATCCCCCCAGAGTTTTCCTTAGTTTTTT
26._SCA_11
ATCCCCCC____CCTTAG_TT_
27._SCA_11
ATCCCCCC____CCTTAG_TT_
28._SCA_11
ATCCCCCC____CCTTAG_TT_
29._SCA_11
ATCCCCCC____CCTTAG_TT_
30._SCA_11
ATCCCCCC____CCTTAG_TT_
31._SCA_11
ATCCCCCC____CCTTAG_TT_
32._SCA_11
ATCCCCCC____CCTTAG_TT_
33._SCA_11
ATCCCCCC____CCTTAG_TT_
34._SCA_11
ATCCCCCC____CCTTAG_TT_
35._SCA_11
ATCCCCCC____CCTTAG_TT_
36._SCA_11
ATCCCCCC____CCTTAG_TT_
37._SCA_11
ATCCCCCC____CCTTAG_TT_
38._SCA_11
ATCCCCCC____CCTTAG_TT_
39._SCA_11
ATCCCCCC____CCTTAG_TT_
40._SCA_11
ATCCCCCC____CCTTAG_TT_
41._SCA_11
ATCCCCCC____CCTTAG_TT_
42._SCA_11
ATCCCCCC____CCTTAG_TT_
43._SCA_11
ATCCCCCC____CCTTAG_TT_
44._SCA_11
ATCCCCCC____CCTTAG_TT_
45._SCA_11
ATCCCCCC____CCTTAG_TT_
46._SCA_11
ATCCCCCC____CCTTAG_TT_
47._SCA_11
ATCCCCCC____CCTTAG_TT_
48._SCA_11
ATCCCCCC____CCTT__TT_
49._SCA_11
ATCCCCCC____CCTTAG___
50._SCA_11
AT_CCCC____CCTTAG_TT_
51._SCA_11
ATCCCCCC____CCTTAG_TT_
52._RUQ_374
AACCCCCC____CCCTAA_TT_
53._SCA_11
AACCCCCC____CCTTAA_TT_
54._RUQ_374
__CCCC__CC_CC__TTTT_
55._RUQ_1686
___AA____CC___CT_
56._RUQ_1686
ATCC_CCAGAG_AAGG_AGAAAAAA
57._MITC-000057
AACC_CCGGAA_AAGG_AAAAAAAA
58._SCA_11
AAAATTCC____CTTTGG_CC_
 1516171819202122232425262728
_Input profile
ATAAAAGGCCCGCCCCAACTGGAAAAGG
1._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
2._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
3._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
4._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
5._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
6._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
7._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
8._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
9._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
10._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
11._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
12._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
13._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
14._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
15._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
16._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
17._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
18._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
19._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
20._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
21._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
22._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
23._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
24._GC-08-157-3-56
ATAAAAGGCCCGCCCCAACTGGAAAAGG
25._GC-01-117-6-14
ATAAAAGGCCCGCCCCAACTGGAAAAGG
26._SCA_11
___GG__CC____AAAA_
27._SCA_11
___GG__CC____AAAA_
28._SCA_11
___GG__CC____AAAA_
29._SCA_11
___GG__CC____AAAA_
30._SCA_11
___GG__CC____AAAA_
31._SCA_11
___GG__CC____AAAA_
32._SCA_11
___GG__CC____AAAA_
33._SCA_11
___GG__CC____AAAA_
34._SCA_11
___GG__CC____AAAA_
35._SCA_11
___GG__CC____AAAA_
36._SCA_11
___GG__CC____AAAA_
37._SCA_11
___GG__CC____AAAA_
38._SCA_11
___GG__CC____AAAA_
39._SCA_11
___GG__CC____AAAA_
40._SCA_11
___GG__CC____AAAA_
41._SCA_11
___GG__CC____AAAA_
42._SCA_11
___GG__CC____AAAA_
43._SCA_11
___GG__CC____AAAA_
44._SCA_11
___GG__CC____AAAA_
45._SCA_11
___GG__CC____AAAA_
46._SCA_11
___GG__CC____AAAA_
47._SCA_11
___GG__CC____AAAA_
48._SCA_11
___GG__CC____AAAA_
49._SCA_11
___GG__CC____AAAA_
50._SCA_11
___GG__CC____AAAA_
51._SCA_11
___GG__CC____AAAA_
52._RUQ_374
___GG__CC____AAAA_
53._SCA_11
___GG__CC____AAAA_
54._RUQ_374
_____GG____GG_AAGG
55._RUQ_1686
__GG__GG_CT__GG_ATCC
56._RUQ_1686
ATAAAAGGGG_CCGGAAAGGGAAAACC
57._MITC-000057
AAACAAGGGG_CCGGAGGGGGAAAA_
58._SCA_11
___AA__GG____TTAT_
 2930313233343536373839404142
_Input profile
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
1._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
2._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
3._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
4._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
5._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
6._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
7._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
8._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
9._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
10._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
11._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
12._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
13._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
14._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
15._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
16._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
17._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
18._GC-08-157-3-56
TTTTTTGGCGCCAAGGTT_AGCCGGCC
19._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
20._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
21._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
22._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCC_CC
23._GC-08-157-3-56
TTTTTTGGCG_AAGGTTTTAGCCGGCC
24._GC-08-157-3-56
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
25._GC-01-117-6-14
TTTTTTGGCGCCAAGGTTTTAGCCGGCC
26._SCA_11
TT___CG_AAGG__AG___
27._SCA_11
TT___CG_AAGG__AG___
28._SCA_11
TT___CG_AAGG__AG___
29._SCA_11
TT___CG_AAGG__AG___
30._SCA_11
TT___CG_AAGG__AG___
31._SCA_11
TT___CG_AAGG__AG___
32._SCA_11
TT___CG_AAGG__AG___
33._SCA_11
TT___CG_AAGG__AG___
34._SCA_11
TT___CG_AAGG__AG___
35._SCA_11
TT___CG_AAGG__AG___
36._SCA_11
TT___CG_AAGG__AG___
37._SCA_11
TT___CG_AAGG__AG___
38._SCA_11
TT___CG_AAGG__AG___
39._SCA_11
TT___CG_AAGG__AG___
40._SCA_11
TT___CG_AAGG__AG___
41._SCA_11
TT___CG_AAGG__AG___
42._SCA_11
TT___CG_AAGG__AG___
43._SCA_11
TT___CG_AAGG__AG___
44._SCA_11
TT___CG_AAGG__AG___
45._SCA_11
TT___CG_AAGG__AG___
46._SCA_11
TT___CG_AAGG__AG___
47._SCA_11
TT___CG_AAGG__AG___
48._SCA_11
TT___CG_AAGG__AG___
49._SCA_11
TT___CG_AAGG__AG___
50._SCA_11
TT___CG_AAGG__AG___
51._SCA_11
TT___CG_AAGG__AG___
52._RUQ_374
TT___CC_AAGG__AG___
53._SCA_11
TT___CC_AAGG__AA___
54._RUQ_374
___AGCCCCAAGG__AACC__
55._RUQ_1686
___GGGG____TT_CC__
56._RUQ_1686
TTAAAAGGCGCCAACCAAAAAGGGGGGG
57._MITC-000057
TTAAAAAGCCCCAACCAAAAAAGGGGGG
58._SCA_11
AA___CC_AATT__AA___
 4344454647484950515253545556
_Input profile
GGTTTTGGAGAACCCCAAAAGGTTTTCC
1._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGGTTTTCC
2._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
3._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGGTTTTCC
4._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGGTTTTCC
5._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGGTTTTCC
6._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
7._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
8._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
9._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
10._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
11._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
12._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
13._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
14._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
15._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
16._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
17._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGGTTTTCC
18._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
19._GC-08-157-3-56
GGTTTTGGAG_CCCCAAAAGGTTTTCC
20._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
21._GC-08-157-3-56
GGTTTTGGAG_CCCCAAAAGGTTTTCC
22._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
23._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
24._GC-08-157-3-56
GGTTTTGGAGAACCCCAAAAGGTTTTCC
25._GC-01-117-6-14
GGTTTTGGAGAACCCCAAAAGG_TTCC
26._SCA_11
__TT_________TTCC
27._SCA_11
__TT_________TTCC
28._SCA_11
__TT_________TTCC
29._SCA_11
__TT_________TTCC
30._SCA_11
__TT_________TTCC
31._SCA_11
__TT_________TTCC
32._SCA_11
__TT_________TTCC
33._SCA_11
__TT_________TTCC
34._SCA_11
__TT_________TTCC
35._SCA_11
__TT_________TTCC
36._SCA_11
__TT_________TTCC
37._SCA_11
__TT_________TTCC
38._SCA_11
__TT_________TTCC
39._SCA_11
__TT_________TTCC
40._SCA_11
__TT_________TTCC
41._SCA_11
__TT_________TTCC
42._SCA_11
__TT_________TTCC
43._SCA_11
__TT_________TTCC
44._SCA_11
__TT_________TTCC
45._SCA_11
__TT_________TTCC
46._SCA_11
__TT_________TTCC
47._SCA_11
__TT_________TTCC
48._SCA_11
__TT_________TTCC
49._SCA_11
__TT_________TTCC
50._SCA_11
__TT_________TTCC
51._SCA_11
__TT_________TTCC
52._RUQ_374
__TT_________TTCC
53._SCA_11
__TT_________TTCC
54._RUQ_374
GGTT__AA______CCTT_
55._RUQ_1686
_TT_AA________CC_
56._RUQ_1686
CC_AA_AGAAGG_AAAACCAGAAGG
57._MITC-000057
CC_AA_AAAAGG_AAAACCGGAAGG
58._SCA_11
__CC_________CTCT
 5758596061626364656667686970
_Input profile
TTAGCCCCTTCCCGGGAAAAGGGGAACT
1._GC-01-117-6-14
TTAGCCCCTTCCCGGGAAAAGGGGAACT
2._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
3._GC-01-117-6-14
TTAGCCCCTTCCCGGGAAAAGGGGAACT
4._GC-01-117-6-14
TTAGCCCCTTCCCGGGAAAAGGGGAACT
5._GC-01-117-6-14
TTAGCCCCTTCCCGGGAAAAGGGGAACT
6._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
7._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
8._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
9._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
10._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
11._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
12._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
13._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
14._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
15._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAA_GGAACT
16._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
17._GC-01-117-6-14
TTAGCCCCTTCCCGGGAAAAGGGGAACT
18._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
19._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
20._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
21._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
22._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
23._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
24._GC-08-157-3-56
TTAGCCCCTTCCCGGGAAAAGGGGAACT
25._GC-01-117-6-14
TT_CCCCTTCCCGGGAAAAGGGGAACT
26._SCA_11
__CC_TTCCCG_AAAAGGGG__
27._SCA_11
__CC_TTCCCG_AAAAGGGG__
28._SCA_11
__CC_TTCCCG_AAAAGGGG__
29._SCA_11
__CC_TTCCCG_AAAAGGGG__
30._SCA_11
__CC_TTCCCG_AAAAGGGG__
31._SCA_11
__CC_TTCCCG_AAAAGGGG__
32._SCA_11
__CC_TTCCCG_AAAAGGGG__
33._SCA_11
__CC_TTCCCG_AAAAGGGG__
34._SCA_11
__CC_TTCCCG_AAAAGGGG__
35._SCA_11
__CC_TTCCCG_AAAAGGGG__
36._SCA_11
__CC_TTCCCG_AAAAGGGG__
37._SCA_11
__CC_TTCCCG_AAAAGGGG__
38._SCA_11
__CC_TTCCCG_AAAAGGGG__
39._SCA_11
__CC_TTCCCG_AAAAGGGG__
40._SCA_11
__CC_TTCCCG_AAAAGGGG__
41._SCA_11
__CC_TTCCCG_AAAAGGGG__
42._SCA_11
__CC_TTCCCG_AAAAGGGG__
43._SCA_11
__CC_TTCCCG_AAAAGGGG__
44._SCA_11
__CC_TTCCCG_AAAAGGGG__
45._SCA_11
__CC_TTCCCG_AAAAGGGG__
46._SCA_11
__CC_TTCCCG_AAAAGGGG__
47._SCA_11
__CC_TTCCCG_AAAAGGGG__
48._SCA_11
__CC_TTCCCG_AAAAGGGG__
49._SCA_11
__CC_TTCCCG_AAAAGGGG__
50._SCA_11
__CC_TTCCCG_AAAAGGGG__
51._SCA_11
__CC_TTCCCG_AAAA_GG__
52._RUQ_374
__CG_TTCCCG_ACAGGGGG__
53._SCA_11
__CG_TTCCCG_ACAGGGGG__
54._RUQ_374
TT-CGCCTTCC_GGCCAGGGGGAA_
55._RUQ_1686
__CGCC_AA_GGACAG____
56._RUQ_1686
AAAGGGGGAACCCGGGAAAACCCCAA_
57._MITC-000057
AAAGCGGGAACCCGGGACAGCCCCAA_
58._SCA_11
__CC_CTACGG_CCAATTGG__
 7172737475767778798081828384
_Input profile
CCAACCGGCCCCAAAACCCCAACCTTCC
1._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
2._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
3._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
4._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
5._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
6._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
7._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
8._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
9._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
10._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
11._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
12._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
13._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
14._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
15._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
16._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
17._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
18._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
19._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
20._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
21._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
22._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
23._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
24._GC-08-157-3-56
CCAACCGGCCCCAAAACCCCAACCTTCC
25._GC-01-117-6-14
CCAACCGGCCCCAAAACCCCAACCTTCC
26._SCA_11
_AA_____AACC___TTCC
27._SCA_11
_AA_____AACC___TTCC
28._SCA_11
_AA_____AACC___TTCC
29._SCA_11
_AA_____AACC___TTCC
30._SCA_11
_AA_____AACC___TTCC
31._SCA_11
_AA_____AACC___TTCC
32._SCA_11
_AA_____AACC___TTCC
33._SCA_11
_AA_____AACC___TTCC
34._SCA_11
_AA_____AACC___TTCC
35._SCA_11
_AA_____AACC___TTCC
36._SCA_11
_AA_____AACC___TTCC
37._SCA_11
_AA_____AACC___TTCC
38._SCA_11
_AA_____AACC___TTCC
39._SCA_11
_AA_____AACC___TTCC
40._SCA_11
_AA_____AACC___TTCC
41._SCA_11
_AA_____AACC___TTCC
42._SCA_11
_AA_____AACC___TTCC
43._SCA_11
_AA_____AACC___TTCC
44._SCA_11
_AA_____AACC___TTCC
45._SCA_11
_AA_____AACC___TTCC
46._SCA_11
_AA_____AACC___TTCC
47._SCA_11
_AA_____AACC___TTCC
48._SCA_11
_AA_____AACC___TTCC
49._SCA_11
_AA_____AACC___TTCC
50._SCA_11
_AA_____AACC___TTCC
51._SCA_11
_AA_____AACC___TTCC
52._RUQ_374
_GG_____AACC___TTCC
53._SCA_11
_GG_____AACC___TTCC
54._RUQ_374
_______AACC__CCTT_
55._RUQ_1686
CG_______GG____CT
56._RUQ_1686
__CCGGCCCC_AAGGGGAACCAAGG
57._MITC-000057
__CCGGCCCC_AAGGGGAACCAAGG
58._SCA_11
_AA_____CCGG___CCCT
 858687888990919293     
_Input profile
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
1._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
2._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
3._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
4._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
5._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
6._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
7._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
8._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
9._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
10._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
11._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
12._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
13._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
14._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
15._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
16._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
17._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
18._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
19._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
20._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
21._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
22._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
23._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
24._GC-08-157-3-56
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
25._GC-01-117-6-14
CCCCGGCCTTGGCCTTGGX_XX_XX_XX_XX_X
26._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
27._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
28._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
29._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
30._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
31._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
32._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
33._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
34._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
35._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
36._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
37._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
38._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
39._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
40._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
41._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
42._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
43._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
44._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
45._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
46._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
47._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
48._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
49._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
50._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
51._SCA_11
CC_GG_TTGGCC__X_XX_XX_XX_XX_X
52._RUQ_374
CC_GG_CTGTCT__X_XX_XX_XX_XX_X
53._SCA_11
CC_GG_CTGTCT__X_XX_XX_XX_XX_X
54._RUQ_374
__GGCCCTGT___X_XX_XX_XX_XX_X
55._RUQ_1686
_________X_XX_XX_XX_XX_X
56._RUQ_1686
_GG__AACCGGAAGGX_XX_XX_XX_XX_X
57._MITC-000057
_GG__AGACAGAAGGX_XX_XX_XX_XX_X
58._SCA_11
TT_AG_CTGGTT__X_XX_XX_XX_XX_X

Input profile: SCA_11 GC-08-157-3-56

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

1._SCA_11 GC-01-117-6-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

3._SCA_11 GC-01-117-6-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP4
 Mars, 2018

4._SCA_11 GC-01-117-6-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

5._SCA_11 GC-01-117-6-14

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

6._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

8._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

9._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

11._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

12._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

13._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 20
Notes: 20
 Mars, 2018

14._SCA_11 GC-08-157-3-56

identical
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 23
Notes: 23
 Mars, 2018

15._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

16._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

17._SCA_11 GC-01-117-6-14

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

18._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

19._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

20._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

21._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 19
Notes: 19
 Mars, 2018

22._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 24
Notes: 24
 Mars, 2018

23._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 25
Notes: 25
 Mars, 2018

24._SCA_11 GC-08-157-3-56

identical
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 26
Notes: 26
 Mars, 2018

25._SCA_11 GC-01-117-6-14

identical
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

26._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 26
 Dapeng Zhang, 2016

27._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 25
 Dapeng Zhang, 2016

28._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 24
 Dapeng Zhang, 2016

29._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 23
 Dapeng Zhang, 2016

30._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 20
 Dapeng Zhang, 2016

31._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 19
 Dapeng Zhang, 2016

32._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 18
 Dapeng Zhang, 2016

33._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 13
 Dapeng Zhang, 2016

34._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 1 > FP
 Dapeng Zhang, 2016

35._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 10 > F
 Dapeng Zhang, 2016

36._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 2 > FP
 Dapeng Zhang, 2016

37._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 3 > FP
 Dapeng Zhang, 2016

38._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 3
 Dapeng Zhang, 2016

39._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 5
 Dapeng Zhang, 2016

40._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 6
 Dapeng Zhang, 2016

41._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 8
 Dapeng Zhang, 2016

42._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 9
 Dapeng Zhang, 2016

43._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 10
 Dapeng Zhang, 2016

44._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 11
 Dapeng Zhang, 2016

45._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 13
 Dapeng Zhang, 2016

46._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 14
 Dapeng Zhang, 2016

47._SCA_11

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 4
 Dapeng Zhang, 2016

48._SCA_11

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 15
 Dapeng Zhang, 2016

49._SCA_11

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

50._SCA_11

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 1
 Dapeng Zhang, 2016

51._SCA_11

identical
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 2
 Dapeng Zhang, 2016

52._SCA_11 RUQ_374

84.2 %
38 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

53._SCA_11

84.2 %
38 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 639
 Dapeng Zhang, 2016

54._SCA_11 RUQ_374

81.7 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

55._SCA_11 RUQ_1686

52 %
25 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

56._SCA_11 RUQ_1686

51.9 %
79 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

57._SCA_11 MITC-000057

44.9 %
78 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

58._SCA_11

39.5 %
38 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP860 18TcSNP1062 19TcSNP836 20TcSNP878
21TcSNP929 22TcSNP413 23TcSNP653 24TcSNP1149 25TcSNP174
26TcSNP32 27TcSNP372 28TcSNP448 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240