SNP Profiles of GU 144 /C   View Data

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 1234567891011121314
_Input profile
AACCCCCCGGGGTTCCCCCCGGTTCCTT
1._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
2._GU_144_/C
AA_CCCC____CCCCGG_CC_
3._GC-08-224-6-20
AA_CCCCGGGGTTCCCCCCGGTTCCTT
4._GU_144_/C
AA_CCCC____CCCCGG_CC_
5._GU_144_/C
AA_CCCC____CCCCGG_CC_
6._GU_144_/C
AA_CCCC____CCCCGG_CC_
7._GU_144_/C
AA_CCCC____CCCCGG_CC_
8._GU_144_/C
AA_CCCC____CCCCGG_CC_
9._GU_144_/C
AA_CCCC____CCCCGG_CC_
10._GU_144_/C
AA_CCCC____CCCCGG_CC_
11._GU_144_/C
AA_CCCC____CCCCGG_CC_
12._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
13._GU_144_/C
AA_CCCC____CCCCGG_CC_
14._GU_144_/C
AA_CCCC____CCCCGG_CC_
15._GU_144_/C
AA_CCCC____CCCCGG_CC_
16._GU_144_/C
AA_CCCC____CCCCGG_CC_
17._GU_144_/C
AA_CCCC____CCCCGG_CC_
18._GU_144_/C
AA_CCCC____CCCCGG_CC_
19._GU_144_/C
AA_CCCC____CCCCGG_CC_
20._GU_144_/C
AA_CCCC____CCCCGG_CC_
21._GC-08-224-6-20
AA_CCCCGGGGTTCCCCCCGGTTCCTT
22._GC-08-224-6-20
AA_CCCCGGGGTTCCCCCCGGTTCCTT
23._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
24._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
25._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
26._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
27._GU_144_/C
AACCCCCC____CCCCGG_CC_
28._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
29._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
30._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
31._GC-08-224-6-20
AA_CCCCGGGGTTCCCCCCGGTTCCTT
32._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
33._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
34._GC-08-223-6-19
AA_CCCCGGGGTTCCCCCCGGTTCCTT
35._GC-01-073-4-09
AA_CCCCGGGGTTCCCCCCGGTTCCTT
36._RUQ_191
AACCCCCC____CCCCGG_CC_
37._RUQ_191
__CCCC__CC_CC__TTCC_
38._GU_144_/C
AA_CCAC____CCCCGG_CC_
39._GU_144_/C
AA_CCAC____CCCCGG_CC_
40._GU_144_/C
AA_CCAC____CCCCGG_CC_
41._GC-01-073-4-09
AA_CCACGGGGCTCCCCCCGGTTCCTT
42._GC-08-224-6-20
AA_CCACGGGGCTCCCCCCGGTTCCTT
43._GC-01-073-4-09
AA_CCACGGGGCTCCCCCCGGTTCCTT
44._GU_144_/C
ATACTTAC____CCCCGG_CC_
45._GU_144_/C
ATACCTAC____CCCTAG_CT_
46._GC-08-223-6-19
ATACTTACAGAGCTCTCCCCGGTTCCCT
47._GC-08-224-6-20
ATACCTACAGAGCTCTCCCTAGTTCTTT
48._GC-01-73-4-9
AA__CCGGGG_GGGG_GGAAGGAA
49._GC-01-73-4-9
AACC_CCGGGG_GGGG_GGAAGGAA
50._RUQ_191
AACC_CCGGGG_GGGG_GGAAGGAA
51._MITC-000578
AACC_CCGGGG_GGGG_GGAAGGAA
52._MITC-000615
AACC_CCGGGG_GGGG_GGAAGGAA
53._GC-01-73-4-9
AACC_ACGGGG_GGGG_GGAAGGAA
 1516171819202122232425262728
_Input profile
AACCGGGGCCGGCTAATTGGAAAACCGG
1._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
2._GU_144_/C
__GG__GG____AAAA_GG
3._GC-08-224-6-20
AACCGGGGCCGGCTAATTGGAAAACCGG
4._GU_144_/C
__GG__GG____AAAA_GG
5._GU_144_/C
__GG__GG____AAAA_GG
6._GU_144_/C
__GG__GG____AAAA_GG
7._GU_144_/C
__GG__GG____AAAA_GG
8._GU_144_/C
__GG__GG____AAAA_GG
9._GU_144_/C
__GG__GG____AAAA_GG
10._GU_144_/C
__GG__GG____AAAA_GG
11._GU_144_/C
__GG__GG____AAAA_GG
12._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
13._GU_144_/C
__GG__GG____AAAA_GG
14._GU_144_/C
__GG__GG____AAAA_GG
15._GU_144_/C
__GG__GG____AAAA_GG
16._GU_144_/C
__GG__GG____AAAA_GG
17._GU_144_/C
__GG__GG____AAAA_GG
18._GU_144_/C
__GG__GG____AAAA_GG
19._GU_144_/C
__GG__GG____AAAA_GG
20._GU_144_/C
__GG__GG____AAAA_GG
21._GC-08-224-6-20
AACCGGGGCCGGCTAATTGGAAAACCGG
22._GC-08-224-6-20
AACCGGGGCCGGCTAATTGGAAAACCGG
23._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
24._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
25._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
26._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
27._GU_144_/C
__GG__GG____AAAA_GG
28._GC-01-073-4-09
AACCGGGGCCGGCTAA_GGAAAACCGG
29._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
30._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
31._GC-08-224-6-20
AACCGGGGCCGGCTAATTGGAAAACCGG
32._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
33._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
34._GC-08-223-6-19
AACCGGGGCCGGCTAATTGGAAAACCGG
35._GC-01-073-4-09
AACCGGGGCCGGCTAATTGGAAAACCGG
36._RUQ_191
__GG__GG____AAAA_GG
37._RUQ_191
____CC____GG_AACCGG
38._GU_144_/C
__GG__GG____TTAA_GG
39._GU_144_/C
__GG__GG____TTAA_GG
40._GU_144_/C
__GG__GG____TTAA_GG
41._GC-01-073-4-09
AACCGGGGCCGGTTAATTGGTTAACCGG
42._GC-08-224-6-20
AACCGGGG_GGTTAATTGGTTAACCGG
43._GC-01-073-4-09
AACCGGGGCCGGTTAATTGGTTAACCGG
44._GU_144_/C
__AA__CC____ATAA_GG
45._GU_144_/C
__GG__CG____ATAA_CC
46._GC-08-223-6-19
AACCAACGCCCCCCAATTGGATAACGGG
47._GC-08-224-6-20
ATAAGGCGCGCGCTAACTGGATAACGCC
48._GC-01-73-4-9
TTCCGGCC_GGAGGGAAGGAAAAGGCC
49._GC-01-73-4-9
TTCCGGCC_GGAGGGAAGGAAAAGGCC
50._RUQ_191
TTCCGGCC_GGAGGGAAGGAAAAGGCC
51._MITC-000578
TTCCGGCC_GGAGGGAAGGAAAAGGCC
52._MITC-000615
TTCCGGCC_GGAGGGAAGGAAAAGGCC
53._GC-01-73-4-9
TTCCGGCC_GGAAGGAAGGTTAAGGCC
 2930313233343536373839404142
_Input profile
AATTTTGGCCCCAATTGGGGGGCCAGCC
1._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
2._GU_144_/C
AA___CC_AATT__GG___
3._GC-08-224-6-20
AATTTTGGCCCCAATTGGGGGGCCAGCC
4._GU_144_/C
AA___CC_AATT__GG___
5._GU_144_/C
AA___CC_AATT__GG___
6._GU_144_/C
AA___CC_AATT__GG___
7._GU_144_/C
AA___CC_AATT__GG___
8._GU_144_/C
AA___CC_AATT__GG___
9._GU_144_/C
AA___CC_AATT__GG___
10._GU_144_/C
AA___CC_AATT__GG___
11._GU_144_/C
AA___CC_AATT__GG___
12._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
13._GU_144_/C
AA___CC_AATT__GG___
14._GU_144_/C
AA___CC_AATT__GG___
15._GU_144_/C
AA___CC_AATT__GG___
16._GU_144_/C
AA___CC_AATT__GG___
17._GU_144_/C
AA___CC_AATT__GG___
18._GU_144_/C
AA___CC_AATT__GG___
19._GU_144_/C
AA___CC_AATT__GG___
20._GU_144_/C
AA___CC_AATT__GG___
21._GC-08-224-6-20
AATTTTGGCCCCAATTGGGGGGCCAGCC
22._GC-08-224-6-20
AATTTTGGCCCCAATTGGGGGG_AGCC
23._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
24._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
25._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
26._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
27._GU_144_/C
AA___CC_AATT__GG___
28._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
29._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
30._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
31._GC-08-224-6-20
AATTTTGGCCCCAATTGGGGGGCCAGCC
32._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
33._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
34._GC-08-223-6-19
AATTTTGGCCCCAATTGGGGGGCCAGCC
35._GC-01-073-4-09
AATTTTGGCCCCAATTGGGGGGCCAGCC
36._RUQ_191
AA___CC_AATT__GG___
37._RUQ_191
___GGCCCCAATT__GGCC__
38._GU_144_/C
AA___CC_GGTT__GG___
39._GU_144_/C
AA___CC_GGTT__GG___
40._GU_144_/C
AA___CC_GGTT__GG___
41._GC-01-073-4-09
AATTTTGGCCCCGGTTGGGGGGCCGGCC
42._GC-08-224-6-20
AATTTTGGCCCCGGTTGGGGGGCCGGCC
43._GC-01-073-4-09
AATTTTGGCCCCGGTTGGGGGGCCGGCC
44._GU_144_/C
AA___CC_GGGT__AA___
45._GU_144_/C
AT___GG_AGGG__AA___
46._GC-08-223-6-19
AATTGTGGCCCCGGGTGTTTAACTAGCC
47._GC-08-224-6-20
ATTTGTGGGGCCAGGGGTTTAACCGGCC
48._GC-01-73-4-9
AAAAAAGGCCCCAAAACCCCGGGGAGGG
49._GC-01-73-4-9
AAAAAAGGCCCCAAAACCCCGGGGAGGG
50._RUQ_191
AAAAAAGGCCCCAAAACCCCGGGGAGGG
51._MITC-000578
AAAAAAGGCCCCAAAACCCCGGGGAGGG
52._MITC-000615
AAAAAAGGCCCCAAAACCCCGGGGAGGG
53._GC-01-73-4-9
AAAAAAGGCCCCGGAACCCCGGGGGGGG
 4344454647484950515253545556
_Input profile
GGTTTTAAGGAACCCCGGGGTTTTTTCC
1._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
2._GU_144_/C
__TT_________TTCC
3._GC-08-224-6-20
GGTTTTAAGGAACCCCGGGGTTTTTTCC
4._GU_144_/C
__TT_________TTCC
5._GU_144_/C
__TT_________TTCC
6._GU_144_/C
__TT_________TTCC
7._GU_144_/C
__TT_________TTCC
8._GU_144_/C
__TT_________TTCC
9._GU_144_/C
__TT_________TTCC
10._GU_144_/C
__TT_________TTCC
11._GU_144_/C
__TT_________TTCC
12._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
13._GU_144_/C
__TT_________TTCC
14._GU_144_/C
__TT_________TTCC
15._GU_144_/C
__TT_________TTCC
16._GU_144_/C
__TT_________TTCC
17._GU_144_/C
__TT_________TTCC
18._GU_144_/C
__TT_________TTCC
19._GU_144_/C
__TT_________TTCC
20._GU_144_/C
__TT_________TTCC
21._GC-08-224-6-20
GGTTTTAAGGAACCCCGGGGTTTTTTCC
22._GC-08-224-6-20
GGTTTTAAGGAACCCCGGGGTTTTTTCC
23._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
24._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
25._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
26._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
27._GU_144_/C
__TT_________TTCC
28._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
29._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
30._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
31._GC-08-224-6-20
GGTTTTAAGGAACCCCGGGGTTTTTTCC
32._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
33._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
34._GC-08-223-6-19
GGTTTTAAGGAACCCCGGGGTTTTTTCC
35._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
36._RUQ_191
__TT_________TTCC
37._RUQ_191
GGTT__GG______CTTT_
38._GU_144_/C
__TT_________TTCC
39._GU_144_/C
__TT_________TTCC
40._GU_144_/C
__TT_________TTCC
41._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
42._GC-08-224-6-20
GGTTTTAAGGAACCCCGGGGTTTTTTCC
43._GC-01-073-4-09
GGTTTTAAGGAACCCCGGGGTTTTTTCC
44._GU_144_/C
__CC__________TT
45._GU_144_/C
__TT_________TTCC
46._GC-08-223-6-19
GGTTCCAAGGAACCCCGGGGGTTT_TT
47._GC-08-224-6-20
GGTTTTAGAGAACCAAAGAGGGTTTTCC
48._GC-01-73-4-9
CC_AA_GGAAGG_GGGGAAAGAAGG
49._GC-01-73-4-9
CC_AA_GGAAGG_GGGGAAAGAAGG
50._RUQ_191
CC_AA_GGAAGG_GGGGAAAGAAGG
51._MITC-000578
CC_AA_GGAAGG_GGGGAAAGAAGG
52._MITC-000615
CC_AA_GGAAGG_GGGGAAAGAAGG
53._GC-01-73-4-9
CC_AA_GGAAGG_GGGGAAAGAAGG
 5758596061626364656667686970
_Input profile
TTGGCCCCCCAAGGGGAAGGGGGGAACC
1._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
2._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
3._GC-08-224-6-20
TTGGCCCCCCAAGGGGAAGGGGGGAACC
4._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
5._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
6._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
7._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
8._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
9._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
10._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
11._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
12._GC-08-223-6-19
TTGGCCCCCCAAGGGGAAGGGGGGAACC
13._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
14._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
15._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
16._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
17._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
18._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
19._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
20._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
21._GC-08-224-6-20
TTGGCCCCCCAAGGGGAAGGGGGGAACC
22._GC-08-224-6-20
TTGGCCCCCCAAGGGGAAGGGGGGAACC
23._GC-08-223-6-19
_GGCCCCCCAAGGGGAAGGGGGGAACC
24._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
25._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
26._GC-08-223-6-19
TTGGCCCCCCAAGGGGAAGGGGGGAACC
27._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
28._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
29._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
30._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
31._GC-08-224-6-20
TTGGCCCCCCAAGGGGAAGGGGGGAACC
32._GC-08-223-6-19
TTGGCCCCCCAAGGGGAAGGGGGGAACC
33._GC-08-223-6-19
TTGGCCCCCCAAGGGGAAGGGGGGAACC
34._GC-08-223-6-19
TTGGCCCCCCAAGGGGAAGGGGGGAACC
35._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
36._RUQ_191
__CC_CCAAGG_AAGGGGGG__
37._RUQ_191
TT-CCCCCCAA_GGAAGGGGGGAA_
38._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
39._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
40._GU_144_/C
__CC_CCAAGG_AAGGGGGG__
41._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
42._GC-08-224-6-20
TTGGCCCCCCAAGGGGAAGGGGGGAACC
43._GC-01-073-4-09
TTGGCCCCCCAAGGGGAAGGGGGGAACC
44._GU_144_/C
__CC_CCACCG_ACAATTGG__
45._GU_144_/C
__CC_TTACCG_CCAAGGGG__
46._GC-08-223-6-19
TTAACCCTCCACCGGGACAATTGGGGTT
47._GC-08-224-6-20
TTGGCCCCTTACCGGGCCAAGGGGAGTT
48._GC-01-73-4-9
AAGGGGGGGGAAGGGGAAGGCCCCAA_
49._GC-01-73-4-9
AAGGGGGGGGAAGGGGAAGGCCCCAA_
50._RUQ_191
AAGGGGGGGGAAGGGGAAGGCCCCAA_
51._MITC-000578
AAGGGGGGGGAAGGGGAAGGCCCCAA_
52._MITC-000615
AAGGGGGGGGAAGGGGAAGGCCCCAA_
53._GC-01-73-4-9
AAGGGGGGGGAAGGGGAAGGCCCCAA_
 7172737475767778798081828384
_Input profile
CCGGCCAAAGCCCCGGAAGGCCTTAACC
1._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
2._GU_144_/C
_GGCC_____AAGG___CC
3._GC-08-224-6-20
CCGGCCAAAGCCCCGGAAGGCCTTAACC
4._GU_144_/C
_GGCC_____AAGG___CC
5._GU_144_/C
_GGCC_____AAGG___CC
6._GU_144_/C
_GGCC_____AAGG___CC
7._GU_144_/C
_GGCC_____AAGG___CC
8._GU_144_/C
_GGCC_____AAGG___CC
9._GU_144_/C
_GGCC_____AAGG___CC
10._GU_144_/C
_GGCC_____AAGG___CC
11._GU_144_/C
_GGCC_____AAGG___CC
12._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
13._GU_144_/C
_GGCC_____AAGG___CC
14._GU_144_/C
_GGCC_____AAGG___CC
15._GU_144_/C
_GGCC_____AAGG___CC
16._GU_144_/C
_GGCC_____AAGG___CC
17._GU_144_/C
_GGCC_____AAGG___CC
18._GU_144_/C
_GGCC_____AAGG___CC
19._GU_144_/C
_GGCC_____AAGG___CC
20._GU_144_/C
_GGCC_____AAGG___CC
21._GC-08-224-6-20
CCGGCCAAAGCCCCGGAAGGCCTTAACC
22._GC-08-224-6-20
CCGGCCAAAGCCCCGGAAGGCCTTAACC
23._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
24._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGG_TTAACC
25._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
26._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
27._GU_144_/C
_GGCC_____AAGG___CC
28._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
29._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
30._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
31._GC-08-224-6-20
CCGGCCAAAGCCCCGGAAGGCCTTAACC
32._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
33._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
34._GC-08-223-6-19
CCGGCCAAAGCCCCGGAAGGCCTTAACC
35._GC-01-073-4-09
CCGGCCAAAGCCCCGGAAGGCCTTAACC
36._RUQ_191
_AGCC_____AAGG___CC
37._RUQ_191
________AAGG__AACC
38._GU_144_/C
_GGCC_____AACG___CC
39._GU_144_/C
_GGCC_____AACG___CC
40._GU_144_/C
_GGCC_____AACG___CC
41._GC-01-073-4-09
CCGGCCAAAGCCCCGGAACGCCTTAACC
42._GC-08-224-6-20
CCGGCCAAAGCCCCGGAACGCCTTAACC
43._GC-01-073-4-09
CCGGCCAAAGCCCCGGAACGCCTTAACC
44._GU_144_/C
_GGTT_____CCGG___TT
45._GU_144_/C
_AACC_____ACCC___TT
46._GC-08-223-6-19
CCGGTTCCAGCCAAAACCGGCCATAATT
47._GC-08-224-6-20
CCAACCACAGCCCCAAACCCCCAACCTT
48._GC-01-73-4-9
__GGAAAGCCCC_AACCGGTTAAGG
49._GC-01-73-4-9
__GGAAAGCCCC_AACCGGTTAAGG
50._RUQ_191
__GGAAAGCCCC_AACCGGTTAAGG
51._MITC-000578
__GGAAAGCCCC_AACCGGTTAAGG
52._MITC-000615
__GGAAAGCCCC_AACCGGTTAAGG
53._GC-01-73-4-9
__GGAAAGCCCC_AACGGGTTAAGG
 85868788899091929394    
_Input profile
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
1._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
2._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
3._GC-08-224-6-20
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
4._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
5._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
6._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
7._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
8._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
9._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
10._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
11._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
12._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
13._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
14._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
15._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
16._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
17._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
18._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
19._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
20._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
21._GC-08-224-6-20
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
22._GC-08-224-6-20
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
23._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
24._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
25._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
26._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
27._GU_144_/C
CCCC_GG_CCTTTT__X_XX_XX_XX_X
28._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
29._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
30._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
31._GC-08-224-6-20
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
32._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
33._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
34._GC-08-223-6-19
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
35._GC-01-073-4-09
CCCCCCGGCCCCTTTTAAGGX_XX_XX_XX_X
36._RUQ_191
CCCC_GG_CCTTTT__X_XX_XX_XX_X
37._RUQ_191
___GGCCCCTT___X_XX_XX_XX_X
38._GU_144_/C
CTCC_AG_CCTTTT__X_XX_XX_XX_X
39._GU_144_/C
CTCC_AG_CCTTTT__X_XX_XX_XX_X
40._GU_144_/C
CTCC_AG_CCTTTT__X_XX_XX_XX_X
41._GC-01-073-4-09
CTCCCCAGCCCCTTTTAAGGX_XX_XX_XX_X
42._GC-08-224-6-20
CTCCCCAGCCCCTTTTAAGGX_XX_XX_XX_X
43._GC-01-073-4-09
CTCCCCAGCCCCTTTTAAGGX_XX_XX_XX_X
44._GU_144_/C
TTTT_AA_CCTTCT__X_XX_XX_XX_X
45._GU_144_/C
CCCC_AG_TTGTCT__X_XX_XX_XX_X
46._GC-08-223-6-19
TTTTCCAACTCCTTCTAAGGX_XX_XX_XX_X
47._GC-08-224-6-20
CCCCCTAGCTTTGTCTTTGGX_XX_XX_XX_X
48._GC-01-73-4-9
GG_GG__GGAAAATTGGX_XX_XX_XX_X
49._GC-01-73-4-9
GG_GG__GGAAAATTGGX_XX_XX_XX_X
50._RUQ_191
GG_GG__GGAAAATTGGX_XX_XX_XX_X
51._MITC-000578
GG_GG__GGAAAATTGGX_XX_XX_XX_X
52._MITC-000615
GG_GG__GGAAAATTGGX_XX_XX_XX_X
53._GC-01-73-4-9
AG_GG__GGAAAATTGGX_XX_XX_XX_X

Input profile: GU_144_/C GC-01-073-4-09

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

1._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

2._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

3._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

5._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

6._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

7._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

8._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

9._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

10._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

11._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

12._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

13._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

14._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

15._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

16._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

17._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

18._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

19._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

20._GU_144_/C

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

21._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

22._GU_144_/C GC-08-224-6-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

23._GU_144_/C GC-08-223-6-19

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

24._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

25._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

26._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

27._GU_144_/C

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

28._GU_144_/C GC-01-073-4-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

29._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

30._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

31._GU_144_/C GC-08-224-6-20

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

32._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

33._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

34._GU_144_/C GC-08-223-6-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

35._GU_144_/C GC-01-073-4-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

36._GU_144_/C RUQ_191

98.8 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

37._GU_144_/C RUQ_191

94.2 %
43 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

38._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

39._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

40._GU_144_/C

89.7 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

41._GU_144_/C GC-01-073-4-09

93 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

42._GU_144_/C GC-08-224-6-20

92.9 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

43._GU_144_/C GC-01-073-4-09

93 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

44._GU_144_/C

50 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

45._GU_144_/C

51.3 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

46._GU_144_/C GC-08-223-6-19

62.9 %
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

47._GU_144_/C GC-08-224-6-20

58.5 %
94 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

48._GU_144_/C GC-01-73-4-9

46.8 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._GU_144_/C GC-01-73-4-9

47.5 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C RUQ_191

47.5 %
80 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_144_/C MITC-000578

47.5 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

52._GU_144_/C MITC-000615

47.5 %
80 shared markers

USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C GC-01-73-4-9

43.8 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

 

 Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP151
56TcSNP1520 57TcSNP799 58TcSNP899 59TcSNP226 60TcSNP1439
61TcSNP1442 62TcSNP193 63TcSNP25 64TcSNP364 65TcSNP144
66TcSNP230 67TcSNP560 68TcSNP723 69TcSNP731 70TcSNP701
71TcSNP1041 72TcSNP645 73TcSNP917 74Tcm003s01336581 75Tcm003s07402719
76Tcm001s00947643 77Tcm006s26664133 78Tcm002s20575712 79TcSNP529 80TcSNP1458
81TcSNP60 82TcSNP430 83TcSNP823 84TcSNP619 85TcSNP994
86TcSNP1144 87TcSNP1156 88TcSNP469 89TcSNP999 90TcSNP242
91TcSNP1253 92TcSNP1414 93TcSNP154 94TcSNP240