SNP Profiles of TSH%20565 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
1._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
2._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
3._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
4._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
5._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
6._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
7._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
8._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
9._GC-01-005-1-05	AA	AC	CT	CC	GG	AG	CT	CT	TT	TT	GG	TT	CT	CT
10._GC-01-005-1-05	AA	AC	CT	CC	GG	_	CT	CT	TT	TT	GG	TT	CT	CT
11._RUQ_1741	_	_	_	CC	_	_	CC	_	_	_	_	_	_	_
12._TSH_565	AA	AC	_	CC	GG	AG	_	AG	AA	_	GG	AA	AG	AG
13._TSH_565	AA	AC	_	CC	GG	AG	_	AG	AA	_	GG	AA	AG	AG
14._TSH_565	AA	AC	_	CC	GG	AG	_	AG	AA	_	GG	AA	AG	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
1._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
2._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
3._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
4._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
5._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
6._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
7._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
8._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
9._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
10._GC-01-005-1-05	AT	AC	AA	AG	CG	CG	CG	CT	AA	CT	AG	AA	AA	GG
11._RUQ_1741	_	_	_	AG	CT	_	_	_	_	_	_	_	_	_
12._TSH_565	AT	AC	AA	AG	CG	_	CG	AG	AG	AG	AG	AA	AA	CC
13._TSH_565	AT	AC	AA	AG	CG	_	CG	AG	AG	AG	AG	AA	AA	CC
14._TSH_565	AT	AC	AA	AG	CG	_	CG	AG	AG	AG	AG	AA	AA	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
1._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
2._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
3._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
4._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
5._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
6._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
7._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
8._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
9._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
10._GC-01-005-1-05	CC	AT	CT	GT	AG	CG	AC	AA	GT	GT	GT	AA	CT	AG
11._RUQ_1741	CC	_	_	_	_	CG	_	AA	_	_	_	_	CT	_
12._TSH_565	GG	AT	AG	AC	AG	CG	AC	AA	AC	AC	AC	AA	AG	AG
13._TSH_565	GG	AT	AG	AC	AG	CG	AC	AA	AC	AC	AC	AA	AG	AG
14._TSH_565	GG	AT	AG	AC	AG	CG	AC	AA	AC	AC	AC	AA	AG	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
1._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
2._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
3._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
4._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
5._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
6._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
7._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
8._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
9._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
10._GC-01-005-1-05	CC	GG	AT	CC	AG	AG	CT	AC	AG	AG	GT	TT	CT	CT
11._RUQ_1741	_	_	_	_	_	AG	_	_	_	_	_	_	_	_
12._TSH_565	GG	CC	_	GG	_	AG	AG	_	AG	AG	AC	AG	AG	AG
13._TSH_565	GG	CC	_	GG	_	AG	AG	_	AG	AG	AC	AG	AG	AG
14._TSH_565	GG	CC	_	GG	_	AG	AG	_	AG	AG	AC	AG	AG	AG

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
1._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
2._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
3._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
4._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
5._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
6._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
7._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
8._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
9._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
10._GC-01-005-1-05	GT	AG	CG	CT	CC	AC	CG	AG	AC	AA	GT	GT	AG	CC
11._RUQ_1741	_	AG	_	_	_	_	_	_	AC	AA	_	GT	AG	_
12._TSH_565	AC	AG	CG	AG	GG	AC	CG	AG	AC	AA	AC	AC	AG	_
13._TSH_565	AC	AG	CG	AG	GG	AC	CG	AG	AC	AA	AC	AC	AG	_
14._TSH_565	AC	AG	CG	AG	GG	AC	CG	AG	AC	AA	AC	AC	AG	_

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
_Input profile	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
1._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
2._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
3._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
4._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
5._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
6._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
7._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
8._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
9._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
10._GC-01-005-1-05	CG	AG	CT	AC	GG	CC	AC	AA	AC	CG	CT	AA	CC	TT
11._RUQ_1741	_	GG	_	_	_	_	_	_	AA	CG	_	_	CC	_
12._TSH_565	_	_	AG	AC	GG	CC	AC	_	AC	CG	AG	AA	CC	AA
13._TSH_565	_	_	AG	AC	GG	CC	AC	_	AC	CG	AG	AA	CC	AA
14._TSH_565	_	_	AG	AC	GG	CC	AC	_	AC	CG	AG	AA	CC	AA

	85	86	87	88	89	90	91	92	93	94
_Input profile	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
1._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
2._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
3._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
4._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
5._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
6._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
7._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
8._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
9._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
10._GC-01-005-1-05	CT	CT	CT	AG	CT	CC	GT	CT	AT	AG	X_X	X_X	X_X	X_X
11._RUQ_1741	_	CT	_	_	CT	_	GT	_	_	_	X_X	X_X	X_X	X_X
12._TSH_565	AG	_	AG	_	_	GG	AC	AG	AT	AG	X_X	X_X	X_X	X_X
13._TSH_565	AG	_	AG	_	_	GG	AC	AG	AT	AG	X_X	X_X	X_X	X_X
14._TSH_565	AG	_	AG	_	_	GG	AC	AG	AT	AG	X_X	X_X	X_X	X_X

Input profile: TSH_565 GC-01-005-1-05

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

1._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 15

Notes: 15 > FP4

Mars, 2018

2._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 13

Notes: 13

Mars, 2018

3._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP2

Mars, 2018

4._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

Mars, 2018

5._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

Mars, 2018

6._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP3

Mars, 2018

7._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

8._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

9._TSH_565 GC-01-005-1-05

identical
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

10._TSH_565 GC-01-005-1-05

identical
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

Mars, 2018

11._TSH_565 RUQ_1741

88.1 %
21 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

12._TSH_565

54.4 %
80 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: FP 1

Mars, 2018

13._TSH_565

54.4 %
80 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: FP 4

Mars, 2018

14._TSH_565

54.4 %
80 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: FP 2

Mars, 2018

Key to SNP Markers

1	TcSNP1075	2	TcSNP1350	3	TcSNP534	4	TcSNP591	5	TcSNP42
6	TcSNP418	7	TcSNP702	8	TcSNP1096	9	TcSNP1060	10	TcSNP1165
11	TcSNP429	12	TcSNP75	13	TcSNP891	14	TcSNP122	15	TcSNP316
16	TcSNP521	17	TcSNP860	18	TcSNP1062	19	TcSNP836	20	TcSNP878
21	TcSNP929	22	TcSNP413	23	TcSNP653	24	TcSNP1149	25	TcSNP174
26	TcSNP32	27	TcSNP372	28	TcSNP448	29	TcSNP872	30	TcSNP953
31	TcSNP1034	32	TcSNP1175	33	TcSNP1111	34	TcSNP577	35	TcSNP90
36	TcSNP998	37	TcSNP150	38	TcSNP28	39	TcSNP751	40	TcSNP1484
41	TcSNP602	42	TcSNP561	43	TcSNP894	44	TcSNP1063	45	TcSNP1126
46	TcSNP1270	47	TcSNP606	48	TcSNP329	49	TcSNP944	50	TcSNP1242
51	TcSNP1383	52	TcSNP547	53	TcSNP776	54	TcSNP1309	55	TcSNP151
56	TcSNP1520	57	TcSNP799	58	TcSNP899	59	TcSNP226	60	TcSNP1439
61	TcSNP1442	62	TcSNP193	63	TcSNP25	64	TcSNP364	65	TcSNP144
66	TcSNP230	67	TcSNP560	68	TcSNP723	69	TcSNP731	70	TcSNP701
71	TcSNP1041	72	TcSNP645	73	TcSNP917	74	Tcm003s01336581	75	Tcm003s07402719
76	Tcm001s00947643	77	Tcm006s26664133	78	Tcm002s20575712	79	TcSNP529	80	TcSNP1458
81	TcSNP60	82	TcSNP430	83	TcSNP823	84	TcSNP619	85	TcSNP994
86	TcSNP1144	87	TcSNP1156	88	TcSNP469	89	TcSNP999	90	TcSNP242
91	TcSNP1253	92	TcSNP1414	93	TcSNP154	94	TcSNP240

SNP Profiles of TSH%20565 View Data

Show/Hide Profiles

Input profile: TSH_565 GC-01-005-1-05

1._TSH_565 GC-01-005-1-05

identical 94 shared markers

2._TSH_565 GC-01-005-1-05

identical 94 shared markers

3._TSH_565 GC-01-005-1-05

identical 94 shared markers

4._TSH_565 GC-01-005-1-05

identical 94 shared markers

5._TSH_565 GC-01-005-1-05

identical 94 shared markers

6._TSH_565 GC-01-005-1-05

identical 94 shared markers

7._TSH_565 GC-01-005-1-05

identical 94 shared markers

8._TSH_565 GC-01-005-1-05

identical 94 shared markers

9._TSH_565 GC-01-005-1-05

identical 94 shared markers

10._TSH_565 GC-01-005-1-05

identical 93 shared markers

11._TSH_565 RUQ_1741

88.1 % 21 shared markers

12._TSH_565

54.4 % 80 shared markers

13._TSH_565

54.4 % 80 shared markers

14._TSH_565

54.4 % 80 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
94 shared markers

identical
93 shared markers

88.1 %
21 shared markers

54.4 %
80 shared markers

54.4 %
80 shared markers

54.4 %
80 shared markers