SNP Profiles of GU%20221%20/C   View Data

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 Key

 1234567891011121314
_Input profile
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
1._GU_221_/C
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
2._GC-01-075-4-11
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
3._GC-01-075-4-11
CCGGCCCCTTTTTTCCCCAAGGCCGGCC
4._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
5._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
6._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
7._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
8._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
9._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
10._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
11._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
12._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
13._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
14._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
15._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
16._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
17._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
18._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
19._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
20._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
21._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
22._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
23._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
24._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
25._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
26._RUQ_200
CCAGGGCCTTTTTTCCCCAAGGCCAATT
27._GC-01-075-4-11
CCAGGGCCTTTTTTCCCCAAGGCCAATT
28._GU_221_/C
CCAGGGCCTTTTTTCCCCAAGGCCAATT
29._RUQ_200
_AGGGCC__TT____CCAA_
30._RUQ_200
__GG___TT_CC_GG_AA_
31._GC-01-75-4-11
GGAGCCGGAAAAAA__AAGGGGAAAA
32._RUQ_200
GGAGCCGGAAAAAA__AAGGGGAAAA
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGAACCCCCCGGCCAAGG
1._GU_221_/C
AAGGCCCCGGGGAACCCCCCGGCCAAGG
2._GC-01-075-4-11
AAGGCCCCGGGGAACCCCCCGGCCAAGG
3._GC-01-075-4-11
AAGGCCCCGGGGAACCCCCCGGCCAAGG
4._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
5._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
6._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
7._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
8._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
9._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
10._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
11._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
12._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
13._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
14._GC-01-075-4-11
AAGGCCCCGGGGAGCCACCCGGCCAAAG
15._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
16._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
17._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
18._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
19._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
20._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
21._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
22._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
23._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
24._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
25._GU_221_/C
AAGGCCCCGGGGAGCCACCCGGCCAAAG
26._RUQ_200
AAGGCCCCGGGGAACCACCCGGCCAAAG
27._GC-01-075-4-11
AAGGCCCCGGGGAG_ACCCGGCCAAAG
28._GU_221_/C
AAGGCCCCGGGGAG_ACCCGGCCAAAG
29._RUQ_200
___CCGGGG_CCACCCGGCCAAAG
30._RUQ_200
____GGGGAA_ACCC__AA_
31._GC-01-75-4-11
AAGGGGGGCCCC_GGACCCCC_AA_
32._RUQ_200
AAGGGGGGCCCC_GGACCCCC_AA_
 2930313233343536373839   
_Input profile
GGAACCGGCCAATTTTAAAAGGX_XX_XX_X
1._GU_221_/C
GGAACCGGCCAATTTTAAAAGGX_XX_XX_X
2._GC-01-075-4-11
GGAACCGGCCAATTTTAAAAGGX_XX_XX_X
3._GC-01-075-4-11
GGAACCGGCCAATTTTAAAAGGX_XX_XX_X
4._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
5._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
6._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
7._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
8._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
9._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
10._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
11._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
12._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
13._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
14._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
15._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
16._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
17._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
18._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
19._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
20._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
21._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
22._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
23._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
24._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
25._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
26._RUQ_200
AGAACCGGCCAATTTTAAATGGX_XX_XX_X
27._GC-01-075-4-11
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
28._GU_221_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
29._RUQ_200
_AACCGGCCAATTTTAA__X_XX_XX_X
30._RUQ_200
___GG____AA__X_XX_XX_X
31._GC-01-75-4-11
GGAAGGGGGGAAAAAAAAATGGX_XX_XX_X
32._RUQ_200
GGAAGGGGGGAAAAAAAAATGGX_XX_XX_X

Input profile: GU_221_/C

 
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Mars Center for Cocoa Science, Brazil
Location: 1411 1 > FP
 Dapeng Zhang, 2016

1._GU_221_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 11
 Dapeng Zhang, 2016

2._GU_221_/C GC-01-075-4-11

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

3._GU_221_/C GC-01-075-4-11

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

4._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

5._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

6._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

7._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

8._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13 > FP3
 Mars, 2018

9._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

10._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

11._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

12._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

13._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

14._GU_221_/C GC-01-075-4-11

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

15._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 2
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

16._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 8
 Dapeng Zhang, 2016

17._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 9
 Dapeng Zhang, 2016

18._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 10
 Dapeng Zhang, 2016

19._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 12
 Dapeng Zhang, 2016

20._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 14
 Dapeng Zhang, 2016

21._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 16
 Dapeng Zhang, 2016

22._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 13 > F
 Dapeng Zhang, 2016

23._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 15 > F
 Dapeng Zhang, 2016

24._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 15 > F
 Dapeng Zhang, 2016

25._GU_221_/C

85.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 4 > FP
 Dapeng Zhang, 2016

26._GU_221_/C RUQ_200

85.9 %
39 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

27._GU_221_/C GC-01-075-4-11

85.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

28._GU_221_/C

85.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1411 6
 Dapeng Zhang, 2016

29._GU_221_/C RUQ_200

85.4 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

30._GU_221_/C RUQ_200

80.8 %
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

31._GU_221_/C GC-01-75-4-11

42.6 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_221_/C RUQ_200

42.6 %
34 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25