SNP Profiles of EET 94 [ECU]   View Data

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 Key

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_Input profile
CTAGCGCTCTAACTGTCCCTATAGCCAG
1._EET_94_[ECU]
CTAGCGCTCTAACTGTCCCTATAGCCAG
2._EET_94_[ECU]
CTAGCGCTCTAACTGTCCCTATAGCCAG
3._EET_94_[ECU]
CTAGCGCTCTAACTGTCCCTATAGCCAG
4._EET_94_[ECU]
CTAGCGCTCTAACTGTCCCTATAGCCAG
5._GC-08-147-3-46
CTAGCGCTCTAACTGTCCCTATAGCCAG
6._GC-08-147-3-46
CTAGCGCTCTAACTGTCCCTATAGCCAG
7._GC-08-147-3-46
CTAGCGCTCTAACTGTCCCTATAGCCAG
8._GC-08-147-3-46
CTAGCGCTCTAACTGTCCCTATAGCCAG
9._GC-08-147-3-46
CTAGCGCTCTAACTGTCCCTATAGCCAG
10._EET_94_[ECU]
CTAGCGCTCTACCTGTCCCTATAGCCAG
 1516171819202122232425262728
_Input profile
TTATGGCTCTGGGGAGTTCCCGGTCTAC
1._EET_94_[ECU]
TTATGGCTCTGGGGAGTTCCCGGTCTAC
2._EET_94_[ECU]
TTATGGCTCTGGGGAGTTCCCGGTCTAC
3._EET_94_[ECU]
TTATGGCTCTGGGGAGTTCCCGGTCTAC
4._EET_94_[ECU]
TTATGGCTCTGGGGAGTTCCCGGTCTAC
5._GC-08-147-3-46
TTATGGCTCTGGGGAGTTCCCGGTCTAC
6._GC-08-147-3-46
TTATGGCTCTGGGGAGTTCCCGGTCTAC
7._GC-08-147-3-46
TTATGGCTCTGGGGAGTTCCCGGTCTAC
8._GC-08-147-3-46
TTATGGCTCTGGGGAGTTCCCGGTCTAC
9._GC-08-147-3-46
TTATGGCTCTGGGGAGTTCCCGGTCTAC
10._EET_94_[ECU]
TTATGGCTCTGGGGAATTCCCGGTCTAC
 293031323334353637383940  
_Input profile
AGAGATCCAACGACCTGTCCATCGX_XX_X
1._EET_94_[ECU]
AGAGATCCAACGACCTGTCCATCGX_XX_X
2._EET_94_[ECU]
AGAGATCCAACGACCTGTCCATCGX_XX_X
3._EET_94_[ECU]
AGAGATCCAACGACCTGTCCATCGX_XX_X
4._EET_94_[ECU]
AGAGATCCAACGACCTGTCCATCGX_XX_X
5._GC-08-147-3-46
AGAGATCCAACGACCTGTCCATCGX_XX_X
6._GC-08-147-3-46
AGAGATCCAACGACCTGTCCATCGX_XX_X
7._GC-08-147-3-46
AGAGATCCAACGACCTGTCCATCGX_XX_X
8._GC-08-147-3-46
AGAGATCCAACGACCTGTCCATCGX_XX_X
9._GC-08-147-3-46
AGAGATCCAACGACCTGTCCATCGX_XX_X
10._EET_94_[ECU]
AGAGATCCAACGACCTGTCCATCGX_XX_X

Input profile: EET_94_[ECU]

 
Mars Center for Cocoa Science, Brazil
Location: 8346 3
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

1._EET_94_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 9
 Dapeng Zhang, 2016

2._EET_94_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 8
 Dapeng Zhang, 2016

3._EET_94_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 7
 Dapeng Zhang, 2016

4._EET_94_[ECU]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 6
 Dapeng Zhang, 2016

5._EET_94_[ECU] GC-08-147-3-46

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._EET_94_[ECU] GC-08-147-3-46

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

7._EET_94_[ECU] GC-08-147-3-46

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

8._EET_94_[ECU] GC-08-147-3-46

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

9._EET_94_[ECU] GC-08-147-3-46

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

10._EET_94_[ECU]

96.3 %
40 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

 

 Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25