SNP Profiles of LCT EEN 163/A   View Data

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 Key

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_Input profile
CTCCAAGGTTAACCCCGGCCAAAGTTCC
1._RUQ_178
__AA_TTAACCCGGG__AGTTCC
2._RUQ_178
AGCCAACCAAAACCGGGGGGAAAGTTCG
 1516171819202122232425262728
_Input profile
GGAACCGGGGCCCCTTCCTTAATTCCCC
1._RUQ_178
____GGCCCC______GG
2._RUQ_178
_AA_CCGGCCGGAA_AAAAAACCGG
 2930313233343536373839404142
_Input profile
CCTTGGAACCCCGGGGTTGGCCCCTTCC
1._RUQ_178
CGTT___CC_GGTT__CC_GG
2._RUQ_178
_AAGGAA_GGCCGG__GGGGAAGG
 43             
_Input profile
GGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_178
_X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_178
GGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: LCT_EEN_163_/A RUQ_178

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._LCT_EEN_163_/A RUQ_178

85 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

2._LCT_EEN_163_/A RUQ_178

48.6 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

 Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP899 32TcSNP998 33TcSNP999 34TcSNP1060 35TcSNP1063
36TcSNP1111 37TcSNP1126 38TcSNP1253 39TcSNP1309 40TcSNP1439
41TcSNP1442 42TcSNP1458 43TcSNP1484