SNP Profiles of GU%20123/V   View Data

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 Key

 1234567891011121314
_Input profile
TTCCAATTTTGGAACCGGCCGGGGAACC
1._RUQ_187
__AA_____GG_GG___
2._RUQ_1068
__AA_____GG_GG___
3._RUQ_1068
TTCCAATTTTGGAACCGGCCGGGGAACC
4._RUQ_1068
AACCAAAAAAGGAAGGGGGGGGGGAAGG
5._MITC-000597
AACCAAAAAAGGAAGGGGGGGGGGAAGG
 1516171819202122232425262728
_Input profile
AGAACCGGCCCCCCTTCCGGAATTAAGG
1._RUQ_187
_AA__CCCCCC_CCGGAA_AAGG
2._RUQ_1068
_AA__CCCCCC_CCGGAA_AAGG
3._RUQ_1068
AGAACCGGCCCCCCTTCCGGAATTAAGG
4._RUQ_1068
_AA_CCCCCCGGAA_CCAAAAAACC
5._MITC-000597
_AA_CCCCCCGGAA_CCAAAAAACC
 2930313233343536373839404142
_Input profile
CCCCAACCCCGGGGTTTTTTCCCCGGGG
1._RUQ_187
__AACC____TT___GG_
2._RUQ_1068
___CC____TT___GG_
3._RUQ_1068
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
4._RUQ_1068
_GGAG_GGCCGG_AAAAGGGGCCGG
5._MITC-000597
_GGAG_GGCCGG_AAAAGGGGCCGG

Input profile: GU_123_/V RUQ_187

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._GU_123_/V RUQ_187

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._GU_123_/V RUQ_1068

identical
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._GU_123_/V RUQ_1068

98.8 %
42 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

4._GU_123_/V RUQ_1068

43.1 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

5._GU_123_/V MITC-000597

43.1 %
36 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484