SNP Profiles of GU 261 /P   View Data

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 Key

 1234567891011121314
_Input profile
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
1._RUQ_1370
_____CC____GG___
2._GU_261_/P
_____CCGG_______
3._GU_261_/P
_____CCGG_AA_____
4._GU_261_/P
_____CCGG_AA_____
5._GU_261_/P
_____CCGG_AA_____
6._GU_261_/P
_____CCGG_AA_____
7._GU_261_/P
_____CCGG_______
8._GU_261_/P
_____CCGG_AA_____
9._GU_261_/P
_____CCGG_AA_____
10._GU_261_/P
_____CCGG_AA_____
11._GU_261_/P
_____CCGG_AA_____
12._GU_261_/P
_____CCGG_AA_____
13._RUQ_1370
_____CCGG_AA_____
14._GU_261_/P
_____CCGG_AA_____
15._GU_261_/P
_____CCGG_AA_____
16._GU_261_/P
_____CCGG_AA_____
17._GU_261_/P
_____CCGG_AA_____
18._GU_261_/P
_____CCGG_AA_____
19._GU_261_/P
_____CCGG_AA_____
20._GU_261_/P
_____CCGG_AA_____
21._GU_261_/P
_____CCGG_AA_____
22._GU_261_/P
_____CCGG_AA_____
23._GU_261_/P
_____CCGG_AA_____
24._GU_261_/P
_____CCGG_AA_____
25._GU_261_/P
_____CCGG_AA_____
26._GU_261_/P
_____CCGG_AA_____
27._GU_261_/P
_____CCGG_AA_____
28._GU_261_/P
_____CCGG_AA_____
29._GU_261_/P
_____CCGG_AA_____
30._GU_261_/P
_____CCGG_AA_____
31._GU_261_/P
_____CCGG_AA_____
32._GU_261_/P
_____CCGG_AA_____
33._GU_261_/P
_____CCGG_AA_____
34._GU_261_/P
_____CCGG_AA_____
35._GU_261_/P
_____CCGG_AA_____
36._GU_261_/P
_____CCGG_AA_____
37._RUQ_1370
_____CC_GG__GG___
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGGGGGAAAA
1._RUQ_1370
_______CCAA_GG__TT
2._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
3._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
4._GU_261_/P
_TTTT___TT_AACCCCGGTT_
5._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
6._GU_261_/P
_TTTT___TT_AACCCCGGTT_
7._GU_261_/P
_GTTT___TT_AACCCC_TT_
8._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
9._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
10._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
11._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
12._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
13._RUQ_1370
_TTTT_CC_TT_AACCCCGGTTTT
14._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
15._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
16._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
17._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
18._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
19._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
20._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
21._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
22._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
23._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
24._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
25._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
26._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
27._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
28._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
29._GU_261_/P
_TTTT___TT_AACCCC_TTTT
30._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
31._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
32._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
33._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
34._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
35._GU_261_/P
_TTTT___TT_AACCCCGGTTTT
36._GU_261_/P
_TTTT_CC_TT_AACCCCGGTTTT
37._RUQ_1370
_TT_TT___CCAACCCCGGTTTT
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
1._RUQ_1370
__GGAAGGGG_______GG
2._GU_261_/P
CC__AACCGG_CCGG__AA__
3._GU_261_/P
CC__AACCGG_CCGG__AA__
4._GU_261_/P
CC__AACCGG_CCGG__AA__
5._GU_261_/P
CC__AACCGG_CCGG__AA__
6._GU_261_/P
CC__AACCGG_CCGG__AA__
7._GU_261_/P
CC__ACCCGG_CCGG__AA__
8._GU_261_/P
CC__AACCGG_CCGG__AA__
9._GU_261_/P
CC__AACCGG_CCGG__AA__
10._GU_261_/P
CC__AACCGG_CCGG__AA__
11._GU_261_/P
CC__AACCGG_CCGG__AA__
12._GU_261_/P
CC__AACCGG_CCGG__AA__
13._RUQ_1370
CC__AACCGG_CCGG__AA__
14._GU_261_/P
CC__AACCGG_CCGG__AA__
15._GU_261_/P
CC__AACCGG_CCGG__AA__
16._GU_261_/P
CC__AACCGG_CCGG__AA__
17._GU_261_/P
CC__AACCGG_CCGG__AA__
18._GU_261_/P
CC__AACCGG_CCGG__AA__
19._GU_261_/P
CC__AACCGG_CCGG__AA__
20._GU_261_/P
CC__AACCGG_CCGG__AA__
21._GU_261_/P
CC__AACCGG_CCGG__AA__
22._GU_261_/P
CC__AACCGG_CCGG__AA__
23._GU_261_/P
CC__AACCGG_CCGG__AA__
24._GU_261_/P
CC__AACCGG_CCGG__AA__
25._GU_261_/P
CC__AACCGG_CCGG__AA__
26._GU_261_/P
CC__AACCGG_CCGG__AA__
27._GU_261_/P
CC__AACCGG_CCGG__AA__
28._GU_261_/P
CC__AACCGG_CCGG__AA__
29._GU_261_/P
CC__AACCGG_CCGG__AA__
30._GU_261_/P
CC__AACCGG_CCGG__AA__
31._GU_261_/P
CC__AACCGG_CCGG__AA__
32._GU_261_/P
CC__AACCGG_CCGG__AA__
33._GU_261_/P
CC__AACCGG_CCGG__AA__
34._GU_261_/P
CC__AACCGG_CCGG__AA__
35._GU_261_/P
CC__AACCGG_CCGG__AA__
36._GU_261_/P
CC__AACCGG_CCGG__AA__
37._RUQ_1370
__GGAACCGG_CC____GGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCGGCC
1._RUQ_1370
AATT____CC______CC
2._GU_261_/P
AA___GG____AA_GG_CC
3._GU_261_/P
AA___GG____AA_GG_CC
4._GU_261_/P
AA___GG____AA_GG_CC
5._GU_261_/P
AA___GG____AA_GG_CC
6._GU_261_/P
AA___GG____AA_GG_CC
7._GU_261_/P
AA___GG____AA_GG_CC
8._GU_261_/P
AA___GG____AA_GG_CC
9._GU_261_/P
AA___GG____AA_GG_CC
10._GU_261_/P
AA___GG____AA_GG_CC
11._GU_261_/P
AA___GG____AA_GG_CC
12._GU_261_/P
AA___GG____AA_GG_CC
13._RUQ_1370
AA___GG____AA_GG_CC
14._GU_261_/P
AA___GG____AA_GG_CC
15._GU_261_/P
AA___GG____AA_GG_CC
16._GU_261_/P
AA___GG____AA_GG_CC
17._GU_261_/P
AA___GG____AA_GG_CC
18._GU_261_/P
AA___GG____AA_GG_CC
19._GU_261_/P
AA___GG____AA_GG_CC
20._GU_261_/P
AA___GG____AA_GG_CC
21._GU_261_/P
AA___GG____AA_GG_CC
22._GU_261_/P
AA___GG____AA_GG_CC
23._GU_261_/P
AA___GG____AA_GG_CC
24._GU_261_/P
AA___GG____AA_GG_CC
25._GU_261_/P
AA___GG____AA_GG_CC
26._GU_261_/P
AA___GG____AA_GG_CC
27._GU_261_/P
AA___GG____AA_GG_CC
28._GU_261_/P
AA___GG____AA_GG_CC
29._GU_261_/P
AA___GG____AA_GG_CC
30._GU_261_/P
AA___GG____AA_GG_CC
31._GU_261_/P
AA___GG____AA_GG_CC
32._GU_261_/P
AA___GG____AA_GG_CC
33._GU_261_/P
AA___GG______GG_CC
34._GU_261_/P
AA___GG____AA_GG_CC
35._GU_261_/P
AA___GG____AA_GG_CC
36._GU_261_/P
AA___GG____AA_GG_CC
37._RUQ_1370
AA_____CC__AA_GG_CC
 5758596061626364656667686970
_Input profile
ACGGGGGGAGAACCAAAACCAAAAAACC
1._RUQ_1370
AC_CC______GG____
2._GU_261_/P
AC__CC__GG_______
3._GU_261_/P
AC__CC__GG_______
4._GU_261_/P
AC__CC__GG_______
5._GU_261_/P
AC__CC__GG_______
6._GU_261_/P
AC__CC__GG_______
7._GU_261_/P
AC__CC__GG_______
8._GU_261_/P
AC__CC__GG_______
9._GU_261_/P
AC__CC__GG_______
10._GU_261_/P
AC__CC__GG_______
11._GU_261_/P
AC__CC__GG_______
12._GU_261_/P
AC__CC__GG_______
13._RUQ_1370
AC__CC__GG_______
14._GU_261_/P
AC__CC__GG_______
15._GU_261_/P
AC__CC__GG_______
16._GU_261_/P
AC__CC__GG_______
17._GU_261_/P
AC__CC__GG_______
18._GU_261_/P
AC__CC__GG_______
19._GU_261_/P
AC__CC__GG_______
20._GU_261_/P
AC__CC__GG_______
21._GU_261_/P
AC__CC__GG_______
22._GU_261_/P
AC__CC__GG_______
23._GU_261_/P
AC__CC__GG_______
24._GU_261_/P
AC__CC__GG_______
25._GU_261_/P
AC__CC__GG_______
26._GU_261_/P
AC__CC__GG_______
27._GU_261_/P
AC__CC__GG_______
28._GU_261_/P
AC__CC__GG_______
29._GU_261_/P
AC__CC__GG_______
30._GU_261_/P
AC__CC__GG_______
31._GU_261_/P
AC__CC__GG_______
32._GU_261_/P
AC__CC__GG_______
33._GU_261_/P
AC__CC__GG_______
34._GU_261_/P
AC__CC__GG_______
35._GU_261_/P
AC__CC__GG_______
36._GU_261_/P
AC__CC__GG_______
37._RUQ_1370
AC_CCCC__GGAATT__TTAA_
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
1._RUQ_1370
GGCCCC_______CC_X_XX_X
2._GU_261_/P
_GG____CCGG_AACCGGX_XX_X
3._GU_261_/P
_GGCC____GG_AACCGGX_XX_X
4._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
5._GU_261_/P
_GGCC___CCGG_AA_GGX_XX_X
6._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
7._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
8._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
9._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
10._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
11._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
12._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
13._RUQ_1370
_GGCC___CCGG_AACCGGX_XX_X
14._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
15._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
16._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
17._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
18._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
19._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
20._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
21._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
22._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
23._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
24._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
25._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
26._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
27._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
28._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
29._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
30._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
31._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
32._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
33._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
34._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
35._GU_261_/P
_GGCC___CCGG_AACCGGX_XX_X
36._GU_261_/P
_GGCC___CCGG_AACCAGX_XX_X
37._RUQ_1370
_GGCC_-CC_____GGX_XX_X

Input profile: GU_261_/P RUQ_1370

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._GU_261_/P RUQ_1370

59.1 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

2._GU_261_/P

46.9 %
32 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 7
 Dapeng Zhang, 2016

3._GU_261_/P

48.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 21
 Dapeng Zhang, 2016

4._GU_261_/P

48.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 8
 Dapeng Zhang, 2016

5._GU_261_/P

48.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 11 > F
 Dapeng Zhang, 2016

6._GU_261_/P

48.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 6
 Dapeng Zhang, 2016

7._GU_261_/P

43.5 %
31 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 2
 Dapeng Zhang, 2016

8._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 9
 Dapeng Zhang, 2016

9._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 1 > FP
 Dapeng Zhang, 2016

10._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 5
 Dapeng Zhang, 2016

11._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 4
 Dapeng Zhang, 2016

12._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 3
 Dapeng Zhang, 2016

13._GU_261_/P RUQ_1370

48.6 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

14._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 11
 Dapeng Zhang, 2016

15._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 12
 Dapeng Zhang, 2016

16._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 13
 Dapeng Zhang, 2016

17._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 14
 Dapeng Zhang, 2016

18._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 15
 Dapeng Zhang, 2016

19._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 16
 Dapeng Zhang, 2016

20._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 17
 Dapeng Zhang, 2016

21._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 18
 Dapeng Zhang, 2016

22._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 19
 Dapeng Zhang, 2016

23._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 20
 Dapeng Zhang, 2016

24._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 6
 Dapeng Zhang, 2016

25._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 2 > FP
 Dapeng Zhang, 2016

26._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 3
 Dapeng Zhang, 2016

27._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8112 10
 Dapeng Zhang, 2016

28._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 14 > F
 Dapeng Zhang, 2016

29._GU_261_/P

45.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 8
 Dapeng Zhang, 2016

30._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 9
 Dapeng Zhang, 2016

31._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 10
 Dapeng Zhang, 2016

32._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 12
 Dapeng Zhang, 2016

33._GU_261_/P

45.5 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 15
 Dapeng Zhang, 2016

34._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 16
 Dapeng Zhang, 2016

35._GU_261_/P

47.1 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1408 5
 Dapeng Zhang, 2016

36._GU_261_/P

47.1 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y16
 Dapeng Zhang, 2016

37._GU_261_/P RUQ_1370

43.2 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 

 Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998