SNP Profiles of TSH-565   View Data

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 Key

 1234567891011121314
_Input profile
CCACGGACAGAAAGCCAAAGAGAGAGAC
1._TSH_565
CCACGGACAGAAAGCCAAAGAGAGAGAC
2._TSH_565
CCACGGACAGAAAGCCAAAGAGAGAGAC
3._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
4._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
5._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
6._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
7._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
8._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
9._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
10._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
11._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
12._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
13._GC-01-005-1-05
CCACGGACCTTTAGGGAACTAGCTCTGT
 1516171819202122232425262728
_Input profile
AGACGGAGACAGAGAGACGGCGAAACAG
1._TSH_565
AGACGGAGACAGAGAGACGGCGAAACAG
2._TSH_565
AGACGGAGACAGAGAGACGGCGAAACAG
3._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
4._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
5._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
6._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
7._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
8._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
9._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
10._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
11._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
12._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
13._GC-01-005-1-05
CTGTCCTTACAGCTCTACCCCGAAGTCT
 2930313233343536373839404142
_Input profile
AGATAGACCGAAAGGGCGACATAAAGAG
1._TSH_565
AGATAGACCGAAAGGGCGACATAAAGAG
2._TSH_565
AGATAGACCGAAAGGGCGACATAAAGAG
3._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
4._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
5._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
6._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
7._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
8._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
9._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
10._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
11._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
12._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
13._GC-01-005-1-05
CTATAGACCGAAAGCCCGGTATAAAGAG
 4344454647484950515253545556
_Input profile
AAAGAGGGGGAACCAGACACAGACAGCG
1._TSH_565
AAAGAGGGGGAACCAGACACAGACAGCG
2._TSH_565
AAAGAGGGGGAACCAGACACAGACAGCG
3._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
4._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
5._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
6._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
7._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
8._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
9._GC-01-005-1-05
AACT_GGGGAAGG_ACACAGGTAGCG
10._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
11._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
12._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
13._GC-01-005-1-05
AACTAGGGGGAAGG_ACACAGGTAGCG
 5758596061626364656667686970
_Input profile
CCAGAGAAAGAAACAGAAACACACCCCG
1._TSH_565
CCAGAGAAAGAAACAGAAACACACCCCG
2._TSH_565
CCAGAGAAAGAAACAGAAACACACCCCG
3._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
4._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
5._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
6._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
7._GC-01-005-1-05
CCCTCTTTAA_GTAGTTGTGTGTCCCG
8._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
9._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
10._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
11._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
12._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
13._GC-01-005-1-05
CCCTCTTTAAAAGTAGTTGTGTGTCCCG
 717273747576777879808182  
_Input profile
AAGGAGGGAGACAGCGAGATAGAAX_XX_X
1._TSH_565
AAGGAGGGAGACAGCGAGATAGAAX_XX_X
2._TSH_565
AAGGAGGGAGACAGCGAGATAGAAX_XX_X
3._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
4._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
5._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
6._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
7._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
8._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
9._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
10._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
11._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
12._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X
13._GC-01-005-1-05
AACCCTCCAGACCTCGCTATCTAAX_XX_X

Input profile: TSH_565

 
Mars Center for Cocoa Science, Brazil
Location: Tree: FP 1
 Mars, 2018

1._TSH_565

identical
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 2
 Mars, 2018

2._TSH_565

identical
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: FP 4
 Mars, 2018

3._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP3
 Mars, 2018

4._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

6._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._TSH_565 GC-01-005-1-05

53.8 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

8._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

9._TSH_565 GC-01-005-1-05

53.8 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

11._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

12._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

13._TSH_565 GC-01-005-1-05

54.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

 

 Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998