SNP Profiles of "PA 107 [PER]"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
2. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
3. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
4. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
5. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
6. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
7. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
8. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
9. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
10. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
11. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
12. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
13. _GC-02-001-1-01
______GGGGAT___AG______CCTTCC______
14. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
15. _GC-02-001-1-01
______GGGGAT___AG______CCTTCCTT___
16. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
17. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
18. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
19. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
20. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
21. _GC-08-111-3-10
______GGGGAT___AG______CCTTCCTT___
22. _2101_2
______GG___AT___________________________
23. _2101_3
______GG___AT___________________________
24. _2101_5
______GG___AT___________________________
25. _2101_7
______GG___AT___________________________
26. _2101_8
______GG___AT___________________________
27. _2101_9
______GG___AT___________________________
28. _2101_10
______GG___AT___________________________
29. _2101_11
______GG___AT___________________________
30. _2101_12
______GG___AT___________________________
31. _2101_15
______GG___AT___________________________
32. _2101_16
______GG___AT___________________________
33. _2101_1_>_FP
______GG___AT___________________________
34. _2101_14_>_F
______GG___AT___________________________
35. _2101_14_>_F
______GG___AT___________________________
36. _2101_4_>_FP
______GG___AT___________________________
37. _8310_7
______GG___AT___________________________
38. _8310_8
______GG___AT___________________________
39. _8310_10
______GG___AT___________________________
40. _8310_13
______GG___AT___________________________
41. _8310_14
______GG___AT___________________________
42. _8310_4_>_FP
______GG___AT___________________________
43. _RUQ_1728
TTCC_________CT___CCTT____________GT
44. _RUQ_1728
______GGCCAT___AG______GGAACCAA___
45. _Plot_90_C0213_2B
______GG___AT___________________________
46. _Marper_D_284
______GG___AT___________________________
47. _MITC-000340
______GGCCAT___AG______GGAACCAA___
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
2. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
3. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
4. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
5. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
6. _GC-02-001-1-01
___ACGT___TTGG______AA___CCAGGGCC
7. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
8. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
9. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
10. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
11. _GC-02-001-1-01
___AC___CTTTGG______AA___CCAGGGCC
12. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
13. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
14. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
15. _GC-02-001-1-01
___ACGTCTTTGG______AA___CCAGGGCC
16. _GC-08-111-3-10
___ACGT___TTGG______AA___CCAGGGCC
17. _GC-08-111-3-10
___ACGTCTTTGG____________CCAGGGCC
18. _GC-08-111-3-10
___ACGTCTTTGG______AA___CCAGGGCC
19. _GC-08-111-3-10
___ACGTCTTTGG______AA___CCAGGGCC
20. _GC-08-111-3-10
___ACGTCTTTGG____________CCAGGGCC
21. _GC-08-111-3-10
___ACGTCTTTGG____________CCAGGGCC
22. _2101_2
___ACGTCT____________AA___CCAG___CC
23. _2101_3
___ACGTCT____________AA___CCAG___CC
24. _2101_5
___ACGTCT____________AA___CCAG___CC
25. _2101_7
___ACGT_______________AA___CCAG___CC
26. _2101_8
___ACGTCT____________AA___CCAG___CC
27. _2101_9
___ACGTCT____________AA___CCAG___CC
28. _2101_10
___ACGTCT____________AA___CCAG___CC
29. _2101_11
___ACGTCT____________AA___CCAG___CC
30. _2101_12
___AC___CT____________AA___CCAG___CC
31. _2101_15
___ACGTCT____________AA___CCAG___CC
32. _2101_16
___ACGTCT____________AA___CCAG___CC
33. _2101_1_>_FP
___ACGTCT____________AA___CCAG___CC
34. _2101_14_>_F
___ACGTCT____________AA___CCAG___CC
35. _2101_14_>_F
___ACGTCT____________AA___CCAG___CC
36. _2101_4_>_FP
___ACGTCT____________AA___CCAG___CC
37. _8310_7
___ACGTCT__________________CCAG___CC
38. _8310_8
___ACGTCT____________AA___CCAG___CC
39. _8310_10
___ACGTCT____________AA___CCAG___CC
40. _8310_13
___ACGTCT__________________CCAG___CC
41. _8310_14
___ACGTCT__________________CCAG___CC
42. _8310_4_>_FP
___ACGT_______________AA___CCAG___CC
43. _RUQ_1728
AAAC____________CCGG___GG___AG______
44. _RUQ_1728
___ACACAGAAGG______AC___GGAGGGGG
45. _Plot_90_C0213_2B
___ACGTCT____________AC___CCAG___CC
46. _Marper_D_284
___ACGTCT____________AC___CCAG___CC
47. _MITC-000340
___ACACAGAAGG______AC___GGAGGGGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
2. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
3. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
4. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
5. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
6. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
7. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
8. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
9. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
10. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
11. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
12. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
13. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
14. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
15. _GC-02-001-1-01
___AAAG___GGAATTGG___GGATCCGG___
16. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
17. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
18. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
19. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
20. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
21. _GC-08-111-3-10
___AAAG___GGAATTGG___GGATCCGG___
22. _2101_2
_______________AA_________GG______GG___
23. _2101_3
_______________AA_________GG______GG___
24. _2101_5
_______________AA_________GG______GG___
25. _2101_7
_______________AA_________GG______GG___
26. _2101_8
_______________AA_________GG______GG___
27. _2101_9
_______________AA_________GG______GG___
28. _2101_10
_______________AA_________GG______GG___
29. _2101_11
_______________AA_________GG______GG___
30. _2101_12
_______________AA_________GG______GG___
31. _2101_15
_______________AA_________GG______GG___
32. _2101_16
_______________AA_________GG______GG___
33. _2101_1_>_FP
_______________AA_________GG______GG___
34. _2101_14_>_F
_______________AA_________GG______GG___
35. _2101_14_>_F
_______________AA_________GG______GG___
36. _2101_4_>_FP
_______________AA_________GG______GG___
37. _8310_7
_______________AA_________GG______GG___
38. _8310_8
_______________AA_________GG______GG___
39. _8310_10
_______________AA_________GG______GG___
40. _8310_13
_______________AA_________GG______GG___
41. _8310_14
_______________AA_________GG______GG___
42. _8310_4_>_FP
_______________AA_________GG______GG___
43. _RUQ_1728
AA___AGAA____________TT_______________
44. _RUQ_1728
___TTAG___GGAAAAGG___GGATGG___GG
45. _Plot_90_C0213_2B
_______________AA_________GG______GG___
46. _Marper_D_284
_______________AA_________GG______GG___
47. _MITC-000340
___TTAG___GGAAAAGG___GGATGG___GG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
2. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
3. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
4. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
5. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
6. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
7. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
8. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
9. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
10. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
11. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
12. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
13. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
14. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
15. _GC-02-001-1-01
___CC___AACT___AATTGGCG___CCCTAG
16. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
17. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
18. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
19. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
20. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
21. _GC-08-111-3-10
___CC___AACT___AATTGGCG___CCCTAG
22. _2101_2
_________AACT______TT___CG___CC______
23. _2101_3
_________AACT______TT___CG___CC______
24. _2101_5
_________AACT______TT___CG___CC______
25. _2101_7
_________AACT______TT___CG___CC______
26. _2101_8
_________AACT______TT___CG___CC______
27. _2101_9
_________AACT______TT___CG___CC______
28. _2101_10
_________AACT______TT___CG___CC______
29. _2101_11
_________AACT______TT___CG___CC______
30. _2101_12
_________AACT______TT___CG___CC______
31. _2101_15
_________AACT______TT___CG___CC______
32. _2101_16
_________AACT______TT___CG___CC______
33. _2101_1_>_FP
_________AACT______TT___CG___CC______
34. _2101_14_>_F
_________AACT______TT___CG___CC______
35. _2101_14_>_F
_________AACT______TT___CG___CC______
36. _2101_4_>_FP
_________AACT______TT___CG___CC______
37. _8310_7
_________AACT______TT___CG___CC______
38. _8310_8
_________AACT______TT___CG___CC______
39. _8310_10
_________AACT______TT___CG___CC______
40. _8310_13
_________AACT______TT___CG___CC______
41. _8310_14
_________AACT______TT___CG___CC______
42. _8310_4_>_FP
_________AACT______TT___CG___CC______
43. _RUQ_1728
AA___CTAA___GG_________CGAACCCT___
44. _RUQ_1728
___CC___AA______AAAAGGCG___CCAG___
45. _Plot_90_C0213_2B
_________AACT______TT___CG___CC______
46. _Marper_D_284
_________AACT______TT___CG___CC______
47. _MITC-000340
___CC___AA______AAAAGGCG___CCAG___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
2. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
3. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
4. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
5. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
6. _GC-02-001-1-01
CT_________GGAA______CCCTGGGG___TT
7. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
8. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
9. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
10. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
11. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
12. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
13. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
14. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
15. _GC-02-001-1-01
CT_________GGAA___AACCCTGGGG___TT
16. _GC-08-111-3-10
CT_________GGAA___AACCCTGGGG___TT
17. _GC-08-111-3-10
CT_________GGAA___AACCCTGGGG___TT
18. _GC-08-111-3-10
CT_________GGAA___AACCCTGGGG___TT
19. _GC-08-111-3-10
CT_________GGAA___AACCCTGGGG___TT
20. _GC-08-111-3-10
CT_________GGAA______CCCTGGGG___TT
21. _GC-08-111-3-10
CT_________GGAA___AACCCTGGGG___TT
22. _2101_2
CT_________GG_______________GG_________
23. _2101_3
CT_________GG_______________GG_________
24. _2101_5
CT_________GG_______________GG_________
25. _2101_7
CT_________GG_______________GG_________
26. _2101_8
CT_________GG_______________GG_________
27. _2101_9
CT_________GG_______________GG_________
28. _2101_10
CT_________GG_______________GG_________
29. _2101_11
CT_________GG_______________GG_________
30. _2101_12
CT_________GG_______________GG_________
31. _2101_15
CT_________GG_______________GG_________
32. _2101_16
CT_________GG_______________GG_________
33. _2101_1_>_FP
CT_________GG_______________GG_________
34. _2101_14_>_F
CT_________GG_______________GG_________
35. _2101_14_>_F
CT_________GG_______________GG_________
36. _2101_4_>_FP
CT_________GG_______________GG_________
37. _8310_7
CT_________GG_______________GG_________
38. _8310_8
CT_________GG_______________GG_________
39. _8310_10
CT_________GG_______________GG_________
40. _8310_13
CT_________GG_______________GG_________
41. _8310_14
CT_________GG_______________GG_________
42. _8310_4_>_FP
CT_________GG_______________GG_________
43. _RUQ_1728
___CTGGCCAA___CC______CCGGGGCT___
44. _RUQ_1728
AG____________GG___AA______CCGG___AA
45. _Plot_90_C0213_2B
CT_________AA_______________GG_________
46. _Marper_D_284
CT_________AA_______________GG_________
47. _MITC-000340
AG____________GG___AA______CCGG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
2. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
3. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
4. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
5. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
6. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
7. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
8. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
9. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
10. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
11. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
12. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
13. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
14. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
15. _GC-02-001-1-01
GGTT___AA___CCAAGGCCCCCCGGCTCG
16. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGGCTCG
17. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGGCTCG
18. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGG___CG
19. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGGCTCG
20. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGGCTCG
21. _GC-08-111-3-10
GGTT___AA___CCAAGGCCCCCCGGCTCG
22. _2101_2
_____________________GG___CC______CTCG
23. _2101_3
_____________________GG___CC______CTCG
24. _2101_5
_____________________GG___CC______CTCG
25. _2101_7
_____________________GG___CC______CTCG
26. _2101_8
_____________________GG___CC______CTCG
27. _2101_9
_____________________GG___CC______CTCG
28. _2101_10
_____________________GG___CC______CTCG
29. _2101_11
_____________________GG___CC______CTCG
30. _2101_12
_____________________GG___CC______CTCG
31. _2101_15
_____________________GG___CC______CTCG
32. _2101_16
_____________________GG___CC______CTCG
33. _2101_1_>_FP
_____________________GG___CC______CTCG
34. _2101_14_>_F
_____________________GG___CC______CTCG
35. _2101_14_>_F
_____________________GG___CC______CTCG
36. _2101_4_>_FP
_____________________GG___CC______CTCG
37. _8310_7
_____________________GG___CC______CTCG
38. _8310_8
_____________________GG___CC_________CG
39. _8310_10
_____________________GG___CC______CTCG
40. _8310_13
_____________________GG___CC______CTCG
41. _8310_14
_____________________GG___CC______CTCG
42. _8310_4_>_FP
_____________________GG___CC______CTCG
43. _RUQ_1728
______TTAAAATT___GG_________GG______
44. _RUQ_1728
CCAA___AA___GGAGCC___GGGGGGAGCG
45. _Plot_90_C0213_2B
_____________________GG___CC______CTCG
46. _Marper_D_284
_____________________GG___CC______CTCG
47. _MITC-000340
CCAA___AA___GGAGCC___GGGGGGAGCG
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
2. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
3. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
4. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
5. _GC-02-001-1-01
CC___AACT___CC______TTCC___CCAGGG
6. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
7. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
8. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
9. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
10. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
11. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
12. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
13. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
14. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
15. _GC-02-001-1-01
CC___AACTAACC______TTCC___CCAGGG
16. _GC-08-111-3-10
CC___AACTAACC______TTCC___CCAGGG
17. _GC-08-111-3-10
CC___ATCTAACC______TTCC___CCAGGG
18. _GC-08-111-3-10
CC___AACTAACC______TTCC___CCAGGG
19. _GC-08-111-3-10
CC___AACTAACC______TTCC___CCAGGG
20. _GC-08-111-3-10
CC___AACTAACC______TTCC___CCAGGG
21. _GC-08-111-3-10
CC___AACTAACC______TTCC___CCAGGG
22. _2101_2
______AACTAA__________________CCAG___
23. _2101_3
______AACTAA__________________CCAG___
24. _2101_5
______AACT_____________________CCAG___
25. _2101_7
______AACTAA__________________CCAG___
26. _2101_8
______AACTAA__________________CCAG___
27. _2101_9
______AACTAA__________________CCAG___
28. _2101_10
______AACTAA__________________CCAG___
29. _2101_11
______AACTAA__________________CCAG___
30. _2101_12
______AACTAA__________________CCAG___
31. _2101_15
______AACTAA__________________CCAG___
32. _2101_16
______AACTAA__________________CCAG___
33. _2101_1_>_FP
______AACTAA__________________CCAG___
34. _2101_14_>_F
______AACTAA__________________CCAG___
35. _2101_14_>_F
______AACTAA__________________CCAG___
36. _2101_4_>_FP
______AACTAA__________________CCAG___
37. _8310_7
______ATCTAA__________________CCAG___
38. _8310_8
______AACTAA__________________CCAG___
39. _8310_10
______AACTAA__________________CCAG___
40. _8310_13
______AACTAA__________________CCAG___
41. _8310_14
______AACTAA__________________CCAG___
42. _8310_4_>_FP
______AACTAA__________________CCAG___
43. _RUQ_1728
___CC______AACCCTAA______CT___AG___
44. _RUQ_1728
GG___AAAGAA_________AA______GGAGCC
45. _Plot_90_C0213_2B
______AACTAA__________________CCAG___
46. _Marper_D_284
______AACTAA__________________CCAG___
47. _MITC-000340
GG___AAAGAA_________AA______GGAGCC
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
2. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
3. _GC-02-001-1-01
AACCAG___TT___TTCTCCGG_________CC
4. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
5. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
6. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
7. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
8. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
9. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
10. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
11. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
12. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
13. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
14. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
15. _GC-02-001-1-01
AACCAG___TTCCTTCTCCGG_________CC
16. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
17. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
18. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
19. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
20. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
21. _GC-08-111-3-10
AACCAG___TTCCTTCTCCGG_________CC
22. _2101_2
AA____________CC______CC_______________
23. _2101_3
AA_____________________CC_______________
24. _2101_5
AA____________CC______CC_______________
25. _2101_7
AA____________CC______CC_______________
26. _2101_8
AA____________CC______CC_______________
27. _2101_9
AA____________CC______CC_______________
28. _2101_10
AA____________CC______CC_______________
29. _2101_11
AA____________CC______CC_______________
30. _2101_12
AA____________CC______CC_______________
31. _2101_15
AA____________CC______CC_______________
32. _2101_16
AA____________CC______CC_______________
33. _2101_1_>_FP
AA____________CC______CC_______________
34. _2101_14_>_F
AA____________CC______CC_______________
35. _2101_14_>_F
AA____________CC______CC_______________
36. _2101_4_>_FP
AA____________CC______CC_______________
37. _8310_7
AA____________CC______CC_______________
38. _8310_8
AA____________CC______CC_______________
39. _8310_10
AA____________CC______CC_______________
40. _8310_13
AA____________CC______CC_______________
41. _8310_14
AA____________CC______CC_______________
42. _8310_4_>_FP
AA____________CC______CC_______________
43. _RUQ_1728
_________TT___CC____________GTAACC___
44. _RUQ_1728
AAGGAG_________AAAG___CC____________
45. _Plot_90_C0213_2B
AA____________CC______CC_______________
46. _Marper_D_284
AA____________CC______CC_______________
47. _MITC-000340
AAGGAG_________AAAG___CC____________
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
2. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
3. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
4. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
5. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
6. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
7. _GC-02-001-1-01
___TT______TTCCGG______TTCTTTCGAG
8. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
9. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
10. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
11. _GC-02-001-1-01
TTTT______TTCC_________TTCTTTCGAG
12. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
13. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
14. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
15. _GC-02-001-1-01
TTTT______TTCCGG______TTCTTTCGAG
16. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
17. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
18. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
19. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
20. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
21. _GC-08-111-3-10
TTTT______TTCCGG______TTCTTTCGAG
22. _2101_2
TTTT_________CC_________TT___TTCGAG
23. _2101_3
TTTT_________CC_________TT___TTCGAG
24. _2101_5
TTTT_________CC_________TT___TTCGAG
25. _2101_7
TTTT_________CC_________TT___TTCGAG
26. _2101_8
___TT_________CC_________TT___TTCGAG
27. _2101_9
TTTT_________CC_________TT___TTCGAG
28. _2101_10
TTTT_________CC_________TT___TTCGAG
29. _2101_11
TTTT_________CC_________TT___TTCGAG
30. _2101_12
TTTT_________CC_________TT___TTCGAG
31. _2101_15
TTTT_________CC_________TT___TTCGAG
32. _2101_16
TTTT_________CC_________TT___TTCGAG
33. _2101_1_>_FP
TTTT_________CC_________TT___TTCGAG
34. _2101_14_>_F
TTTT_________CC_________TT___TTCGAG
35. _2101_14_>_F
TTTT_________CC_________TT___TTCGAG
36. _2101_4_>_FP
TTTT_________CC_________TT___TTCGAG
37. _8310_7
TTTT_________CC_________TT___TTCGAG
38. _8310_8
TTTT_________CC_________TT___TTCGAG
39. _8310_10
TTTT_________CC_________TT___TTCGAG
40. _8310_13
TTTT_________CC_________TT___TTCGAG
41. _8310_14
TTTT_________CC_________TT___TTCGAG
42. _8310_4_>_FP
TTTT_________CC_________TT___TTCGAG
43. _RUQ_1728
TT___GGTT_________AGGG_________CG___
44. _RUQ_1728
AAAA______AACCGG______AAAGAACGAG
45. _Plot_90_C0213_2B
TTTT_________CC_________TT___TTCGAG
46. _Marper_D_284
TTTT_________CC_________TT___TTCGAG
47. _MITC-000340
AAAA______AACCGG______AAAGAACGAG
 127 128 129 130 131 132 133 134       
1. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
2. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
3. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
4. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
5. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
6. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
7. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
8. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
9. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
10. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
11. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
12. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
13. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
14. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
15. _GC-02-001-1-01
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
16. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
17. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
18. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
19. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
20. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
21. _GC-08-111-3-10
CC______AAGGCCAACCX_XX_XX_XX_XX_XX_X
22. _2101_2
CC_____________________X_XX_XX_XX_XX_XX_X
23. _2101_3
CC_____________________X_XX_XX_XX_XX_XX_X
24. _2101_5
CC_____________________X_XX_XX_XX_XX_XX_X
25. _2101_7
CC_____________________X_XX_XX_XX_XX_XX_X
26. _2101_8
CC_____________________X_XX_XX_XX_XX_XX_X
27. _2101_9
CC_____________________X_XX_XX_XX_XX_XX_X
28. _2101_10
CC_____________________X_XX_XX_XX_XX_XX_X
29. _2101_11
CC_____________________X_XX_XX_XX_XX_XX_X
30. _2101_12
CC_____________________X_XX_XX_XX_XX_XX_X
31. _2101_15
CC_____________________X_XX_XX_XX_XX_XX_X
32. _2101_16
CC_____________________X_XX_XX_XX_XX_XX_X
33. _2101_1_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
34. _2101_14_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
35. _2101_14_>_F
CC_____________________X_XX_XX_XX_XX_XX_X
36. _2101_4_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
37. _8310_7
CC_____________________X_XX_XX_XX_XX_XX_X
38. _8310_8
CC_____________________X_XX_XX_XX_XX_XX_X
39. _8310_10
CC_____________________X_XX_XX_XX_XX_XX_X
40. _8310_13
CC_____________________X_XX_XX_XX_XX_XX_X
41. _8310_14
CC_____________________X_XX_XX_XX_XX_XX_X
42. _8310_4_>_FP
CC_____________________X_XX_XX_XX_XX_XX_X
43. _RUQ_1728
___TTAA_______________X_XX_XX_XX_XX_XX_X
44. _RUQ_1728
GG______AA___CCAACCX_XX_XX_XX_XX_XX_X
45. _Plot_90_C0213_2B
CC_____________________X_XX_XX_XX_XX_XX_X
46. _Marper_D_284
CC_____________________X_XX_XX_XX_XX_XX_X
47. _MITC-000340
GG______AA___CCAACCX_XX_XX_XX_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._PA_107_[PER] GC-02-001-1-01
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._PA_107_[PER] GC-02-001-1-01
Location: Tree: 2
Notes: 2
 Mars, 2018
3._PA_107_[PER] GC-02-001-1-01
Location: Tree: 3
Notes: 3
 Mars, 2018
4._PA_107_[PER] GC-02-001-1-01
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018
5._PA_107_[PER] GC-02-001-1-01
Location: Tree: 5
Notes: 5
 Mars, 2018
6._PA_107_[PER] GC-02-001-1-01
Location: Tree: 7
Notes: 7
 Mars, 2018
7._PA_107_[PER] GC-02-001-1-01
Location: Tree: 8
Notes: 8
 Mars, 2018
8._PA_107_[PER] GC-02-001-1-01
Location: Tree: 9
Notes: 9
 Mars, 2018
9._PA_107_[PER] GC-02-001-1-01
Location: Tree: 10
Notes: 10
 Mars, 2018
10._PA_107_[PER] GC-02-001-1-01
Location: Tree: 11
Notes: 11
 Mars, 2018
11._PA_107_[PER] GC-02-001-1-01
Location: Tree: 12
Notes: 12
 Mars, 2018
12._PA_107_[PER] GC-02-001-1-01
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018
13._PA_107_[PER] GC-02-001-1-01
Location: Tree: 15
Notes: 15
 Mars, 2018
14._PA_107_[PER] GC-02-001-1-01
Location: Tree: 16
Notes: 16
 Mars, 2018
15._PA_107_[PER] GC-02-001-1-01
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018
16._PA_107_[PER] GC-08-111-3-10
Location: Tree: 4
Notes: 4 > FP1
 Mars, 2018
17._PA_107_[PER] GC-08-111-3-10
Location: Tree: 7
Notes: 7
 Mars, 2018
18._PA_107_[PER] GC-08-111-3-10
Location: Tree: 8
Notes: 8
 Mars, 2018
19._PA_107_[PER] GC-08-111-3-10
Location: Tree: 10
Notes: 10
 Mars, 2018
20._PA_107_[PER] GC-08-111-3-10
Location: Tree: 13
Notes: 13
 Mars, 2018
21._PA_107_[PER] GC-08-111-3-10
Location: Tree: 14
Notes: 14
 Mars, 2018
22._PA_107_[PER]
Location: 2101 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
23._PA_107_[PER]
Location: 2101 3
 Dapeng Zhang, 2016
24._PA_107_[PER]
Location: 2101 5
 Dapeng Zhang, 2016
25._PA_107_[PER]
Location: 2101 7
 Dapeng Zhang, 2016
26._PA_107_[PER]
Location: 2101 8
 Dapeng Zhang, 2016
27._PA_107_[PER]
Location: 2101 9
 Dapeng Zhang, 2016
28._PA_107_[PER]
Location: 2101 10
 Dapeng Zhang, 2016
29._PA_107_[PER]
Location: 2101 11
 Dapeng Zhang, 2016
30._PA_107_[PER]
Location: 2101 12
 Dapeng Zhang, 2016
31._PA_107_[PER]
Location: 2101 15
 Dapeng Zhang, 2016
32._PA_107_[PER]
Location: 2101 16
 Dapeng Zhang, 2016
33._PA_107_[PER]
Location: 2101 1 > FP
 Dapeng Zhang, 2016
34._PA_107_[PER]
Location: 2101 14 > F
 Dapeng Zhang, 2016
35._PA_107_[PER]
Location: 2101 14 > F
 Dapeng Zhang, 2016
36._PA_107_[PER]
Location: 2101 4 > FP
 Dapeng Zhang, 2016
37._PA_107_[PER]
Location: 8310 7
 Dapeng Zhang, 2016
38._PA_107_[PER]
Location: 8310 8
 Dapeng Zhang, 2016
39._PA_107_[PER]
Location: 8310 10
 Dapeng Zhang, 2016
40._PA_107_[PER]
Location: 8310 13
 Dapeng Zhang, 2016
41._PA_107_[PER]
Location: 8310 14
 Dapeng Zhang, 2016
42._PA_107_[PER]
Location: 8310 4 > FP
 Dapeng Zhang, 2016

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

43._PA_107_[PER] RUQ 1728
 Lambert Motilal, 2023
44._PA_107_[PER] RUQ 1728
Notes: Reading_Collection
 Mars, 2018

Malaysian Cocoa Board (MCB) Malaysia

45._PA_107_[PER]
Location: Plot 90 C0213 2B
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

46._PA_107_[PER]
Location: Marper D 284
 Dapeng Zhang, 2016

USDA-SHRS United States of America

47._PA_107_[PER] MITC-000340
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP305 30TcSNP316
31TcSNP329 32TcSNP363 33TcSNP364 34TcSNP372 35TcSNP413
36TcSNP418 37TcSNP421 38TcSNP429 39TcSNP430 40TcSNP448
41TcSNP469 42TcSNP497 43TcSNP519 44TcSNP521 45TcSNP522
46TcSNP529 47TcSNP534 48TcSNP546 49TcSNP547 50TcSNP560
51TcSNP561 52TcSNP577 53TcSNP589 54TcSNP591 55TcSNP602
56TcSNP606 57TcSNP619 58TcSNP640 59TcSNP642 60TcSNP644
61TcSNP645 62TcSNP653 63TcSNP660 64TcSNP689 65TcSNP701
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1165 108TcSNP1175 109TcSNP1205 110TcSNP1230
111TcSNP1237 112TcSNP1242 113TcSNP1253 114TcSNP1270 115TcSNP1275
116TcSNP1293 117TcSNP1309 118TcSNP1350 119TcSNP1383 120TcSNP1401
121TcSNP1404 122TcSNP1414 123TcSNP1439 124TcSNP1442 125TcSNP1458
126TcSNP1484 127TcSNP1520 128TcSNP1524 129TcSNP1527 130Tcm001s00947643
131Tcm002s20575712 132Tcm003s01336581 133Tcm003s07402719 134Tcm006s26664133