SNP Profiles of "LCT EEN 412"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_1554
__________________________________________
2. _RUQ_1554
CCAA_________TT___CCGG____________GG
3. _RUQ_1554
______CGCCAA___AG______AGAACCAG___
4. _RUQ_1554
______________________________TTCC______
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_1554
___CC___TT___AG______CC___CGAA______
2. _RUQ_1554
AACC____________TTAA___GG___AA______
3. _RUQ_1554
___CCCCAAAAAG______CC___CGAAGGGG
4. _RUQ_1554
___CCGGTT___AG______CC___CGAA___CC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_1554
_______________AGATCC____________CC___
2. _RUQ_1554
TTAC___AACC____________CC____________
3. _RUQ_1554
______ATAA___AGATGGGG___AAAAGG___
4. _RUQ_1554
_________AA___AGAT_______________CCGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_1554
______________________________CG___CCCC
2. _RUQ_1554
___AA___CCAA___AA_________GGAACCCC
3. _RUQ_1554
GG___AC___AC______GGCCGGCG___CCGG
4. _RUQ_1554
____________ACCC______GG___CG___CCCC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_1554
GG____________________________________TT
2. _RUQ_1554
______TTAGCCAG___CC___CCGTAACC___
3. _RUQ_1554
___GG____________AA___AA___ACAA___AA
4. _RUQ_1554
___CC_____________________CCGTAA______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_1554
__________________AACGCGTT____________
2. _RUQ_1554
______TTCCAACC___CG_________GG______
3. _RUQ_1554
AAAA___CC___CGAACG___AACGGGAAGG
4. _RUQ_1554
___TT___CC_________CGGGTT___-______
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_1554
_________CC_______________CC___CT______
2. _RUQ_1554
___GG______AACCCTAA______CC___AG___
3. _RUQ_1554
GG___AAGGAA_________AA______AGAGCC
4. _RUQ_1554
____________AACC_______________-___GG
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_1554
______GG___TT___________________________
2. _RUQ_1554
_________TT___CC_________GGAACCGG___
3. _RUQ_1554
AAGGGG_________AAAAAA____________AG
4. _RUQ_1554
______GG___TT_____________________GG___
 113 114 115 116 117 118 119 120 121 122 123 124 125 126
1. _RUQ_1554
________________________CC___GG_________
2. _RUQ_1554
GGTT_________GGAA_________CC______CC
3. _RUQ_1554
______AAAAGG______AAGGAAGGAGGG___
4. _RUQ_1554
______TT_______________CCTTCCAG______
 127 128 129 130 131          
1. _RUQ_1554
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X
2. _RUQ_1554
AA____________X_XX_XX_XX_XX_XX_XX_XX_XX_X
3. _RUQ_1554
___ACCCGGACX_XX_XX_XX_XX_XX_XX_XX_XX_X
4. _RUQ_1554
_______________X_XX_XX_XX_XX_XX_XX_XX_XX_X

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._LCT_EEN_412 RUQ 1554
 Jocelyn De Wever et al., 2019
2._LCT_EEN_412 RUQ 1554
 Lambert Motilal, 2023
3._LCT_EEN_412 RUQ 1554
Notes: Reading_Collection
 Mars, 2018
4._LCT_EEN_412 RUQ 1554
 Dapeng Zhang, 2014

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP33 7TcSNP42 8TcSNP49 9TcSNP52 10TcSNP60
11TcSNP75 12TcSNP90 13TcSNP122 14TcSNP131 15TcSNP143
16TcSNP144 17TcSNP150 18TcSNP151 19TcSNP154 20TcSNP174
21TcSNP176 22TcSNP189 23TcSNP193 24TcSNP194 25TcSNP226
26TcSNP230 27TcSNP240 28TcSNP242 29TcSNP290 30TcSNP305
31TcSNP316 32TcSNP329 33TcSNP363 34TcSNP364 35TcSNP372
36TcSNP413 37TcSNP418 38TcSNP421 39TcSNP429 40TcSNP430
41TcSNP448 42TcSNP469 43TcSNP497 44TcSNP519 45TcSNP521
46TcSNP522 47TcSNP529 48TcSNP534 49TcSNP546 50TcSNP547
51TcSNP560 52TcSNP561 53TcSNP577 54TcSNP589 55TcSNP591
56TcSNP602 57TcSNP606 58TcSNP619 59TcSNP640 60TcSNP642
61TcSNP644 62TcSNP645 63TcSNP653 64TcSNP660 65TcSNP689
66TcSNP702 67TcSNP723 68TcSNP731 69TcSNP739 70TcSNP751
71TcSNP776 72TcSNP799 73TcSNP800 74TcSNP823 75TcSNP835
76TcSNP836 77TcSNP860 78TcSNP872 79TcSNP878 80TcSNP891
81TcSNP894 82TcSNP899 83TcSNP917 84TcSNP929 85TcSNP944
86TcSNP945 87TcSNP953 88TcSNP994 89TcSNP998 90TcSNP999
91TcSNP1010 92TcSNP1019 93TcSNP1034 94TcSNP1041 95TcSNP1053
96TcSNP1060 97TcSNP1062 98TcSNP1063 99TcSNP1075 100TcSNP1096
101TcSNP1111 102TcSNP1112 103TcSNP1126 104TcSNP1144 105TcSNP1149
106TcSNP1156 107TcSNP1175 108TcSNP1205 109TcSNP1230 110TcSNP1237
111TcSNP1253 112TcSNP1270 113TcSNP1275 114TcSNP1293 115TcSNP1309
116TcSNP1350 117TcSNP1383 118TcSNP1401 119TcSNP1404 120TcSNP1414
121TcSNP1439 122TcSNP1442 123TcSNP1458 124TcSNP1484 125TcSNP1520
126TcSNP1524 127TcSNP1527 128Tcm001s00947643 129Tcm003s01336581 130Tcm003s07402719
131Tcm006s26664133