SNP Profiles of "JA 4 /7 [POU]"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-08-284-8-56
CGGGATAGCCTTCCCTCCGTCTAAGGAC
2. _GC-08-284-8-56
CGGGATAGCCTTCCCTCCGTCTAAGGAC
3. _8856_1
CG___AT_______________CCGTCT______AC
4. _8856_3
CG___AT_______________CCGTCT______AC
5. _8856_5
CG___AT_______________CCGTCT______AC
6. _8856_6
CG___AT_______________CCGTCT______AC
7. _8856_7
CG___AT_______________CCGTCT______AC
8. _Marper_C_27
GG___TT_______________CCGGTT______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-08-284-8-56
CCAAGGCCATAGGGATCTAGAGAACCAG
2. _GC-08-284-8-56
CCAAGGCCATAGGGATCTAGAGAACCAG
3. _8856_1
CCAA___CC_________AT______AG______AG
4. _8856_3
CCAA___CC_________AT______AG______AG
5. _8856_5
CCAA___CC_________AT______AG______AG
6. _8856_6
CCAA___CC_________AT______AG______AG
7. _8856_7
CCAA___CC_________AT______AG______AG
8. _Marper_C_27
CCAA___CC_________AA______GG______AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-08-284-8-56
ACACCTAGGTAGCGCCCTAGCTAGAGAA
2. _GC-08-284-8-56
ACACCTAGGTAGCGCCCTAGCTAGAGAA
3. _8856_1
___ACCT___GT___CGCC______CTAG______
4. _8856_3
___ACCT___GT___CGCC______CTAG______
5. _8856_5
___ACCT___GT___CGCC______CTAG______
6. _8856_6
___ACCT___GT___CGCC______CTAG______
7. _8856_7
___ACCT___GT___CGCC______CTAG______
8. _Marper_C_27
___ACCT___GT___GGCC______TTGG______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-08-284-8-56
TTCTGGAGTTTTTTCCCGAAGGGGCTCG
2. _GC-08-284-8-56
TTCTGGAGTTTTTTCCCGAAGGGGCTCG
3. _8856_1
______GG_____________________GG___CT___
4. _8856_3
______GG_____________________GG___CT___
5. _8856_5
______GG_____________________GG___CT___
6. _8856_6
______GG_____________________GG___CT___
7. _8856_7
______GG_____________________GG___CT___
8. _Marper_C_27
______GT_____________________GG___CT___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-08-284-8-56
AGCTGGCTATTTAACTTTCCCCAGGGAT
2. _GC-08-284-8-56
AGCTGGCTATTTAACTTTCCCCAGGGAT
3. _8856_1
___CTGG___ATTTAA_________CCAG___AT
4. _8856_3
___CTGG___ATTTAA_________CCAG___AT
5. _8856_5
___CTGG___ATTTAA_________CCAG___AT
6. _8856_6
___CTGG___ATTTAA_________CCAG___AT
7. _8856_7
___CTGG___ATTTAA_________CCAG___AT
8. _Marper_C_27
___CTGG___TTTTAA_________CCAG___AT
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-08-284-8-56
CTAGTTCTCTTTCTGTACGTCTTTAAGG
2. _GC-08-284-8-56
CTAGTTCTCTTTCTGTACGTCTTTAAGG
3. _8856_1
_________CT______CT______GTCT___AA___
4. _8856_3
_________CT______CT______GTCT___AA___
5. _8856_5
_________CT______CT______GTCT___AA___
6. _8856_6
_________CT______CT______GTCT___AA___
7. _8856_7
_________CT______CT______GTCT___AA___
8. _Marper_C_27
_________CT______CT______GTCT___AC___
 85 86 87 88 89 90 91 92 93 94 95    
1. _GC-08-284-8-56
CTCTCTCGAGCTAAAAACAGACX_XX_XX_X
2. _GC-08-284-8-56
CTCTCTCGAGCTAAAAACAGACX_XX_XX_X
3. _8856_1
CT___CTCGAGCT_______________X_XX_XX_X
4. _8856_3
CT___CTCGAGCT_______________X_XX_XX_X
5. _8856_5
CT___CTCGAGCT_______________X_XX_XX_X
6. _8856_6
CT___CTCGAGCT_______________X_XX_XX_X
7. _8856_7
CT___CTCGAGCT_______________X_XX_XX_X
8. _Marper_C_27
TT___CTCGAGCC_______________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._JA_4_/7_[POU] GC-08-284-8-56
Location: Tree: 1
Notes: 1
 Mars, 2018
2._JA_4_/7_[POU] GC-08-284-8-56
Location: Tree: 3
Notes: 3
 Mars, 2018
3._JA_4_/7_[POU]
Location: 8856 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016
4._JA_4_/7_[POU]
Location: 8856 3
 Dapeng Zhang, 2016
5._JA_4_/7_[POU]
Location: 8856 5
 Dapeng Zhang, 2016
6._JA_4_/7_[POU]
Location: 8856 6
 Dapeng Zhang, 2016
7._JA_4_/7_[POU]
Location: 8856 7
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

8._JA_4_/7_[POU]
Location: Marper C 27
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133