SNP Profiles of "IMC 105"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _RUQ_863
CTCC____________CC____________ATCC___
2. _RUQ_863
______GGCCTTGG___GGAACCAA___CCAC
3. _RUQ_863
________________________TTCC______CCGT
4. _IMC_105_Fld#_181_Plt#_2
______GGCCTTGG___GGAACCAA___CCAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _RUQ_863
_________CTAG___GG____________TTAC___
2. _RUQ_863
AGATGG______AC___GGGGGGAG______AT
3. _RUQ_863
CT___GG______AC___CCGG___CT_________
4. _IMC_105_Fld#_181_Plt#_2
AGATGG______AC___GGGGGGAG______AT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _RUQ_863
AGAC______________________________CCAC
2. _RUQ_863
AG___GGATGGGGAGATGG___GGAA___AC
3. _RUQ_863
AG___GGAT____________CCAA_________AC
4. _IMC_105_Fld#_181_Plt#_2
AG___GGATGGGGAGATGG___GGAA___AC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _RUQ_863
___AA____________ATAC______TTAGAA___
2. _RUQ_863
______AACCGGGG___ACGGGG_________AA
3. _RUQ_863
CC______GG___GG___ACCCCC____________
4. _IMC_105_Fld#_181_Plt#_2
______AACCGGGG___ACGGGG_________AA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _RUQ_863
CG___TT___AGCT_________ACAACT______
2. _RUQ_863
___AA___CCAG___AAAAAAAC___CCAGGG
3. _RUQ_863
______TTGGAG_________TTAC_________CC
4. _IMC_105_Fld#_181_Plt#_2
___AA___CCAG___AAAAAAAC___CCAGGG
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _RUQ_863
_________GG_________CG______AACC___CC
2. _RUQ_863
___AGCGGGAGGGGG___AAAAAA___AA___
3. _RUQ_863
CCTT___-__________________AACC______
4. _IMC_105_Fld#_181_Plt#_2
___AGCGGGAGGGGG___AAAAAA___AA___
 85 86 87 88 89 90 91 92 93 94 95 96 97 98
1. _RUQ_863
__________________CT____________GGTT___
2. _RUQ_863
AGGGCCAAGGGG______AAAGCC___AAAA
3. _RUQ_863
CT___GG______GG___TT____________TT___
4. _IMC_105_Fld#_181_Plt#_2
AGGGCCAAGGGG______AAAGCC___AAAA
 99 100 101 102 103 104 105 106 107 108 109 110 111 112
1. _RUQ_863
__________________GG______TT____________
2. _RUQ_863
AGCCGGAGGGAACCGGGG___ACAAAAAC
3. _RUQ_863
CT_________CCTTGGGG__________________
4. _IMC_105_Fld#_181_Plt#_2
AGCCGGAGGGAACCGGGG___ACAAAAAC

 Key

International Cocoa Quarantine Centre, Reading (ICQC,R) United Kingdom

1._IMC_105 RUQ 863
 Lambert Motilal, 2023
2._IMC_105 RUQ 863
Notes: Reading_Collection
 Mars, 2018
3._IMC_105 RUQ 863
 Dapeng Zhang, 2014

USDA-TARS United States of America

4._IMC_105 IMC 105_Fld#_181_Plt#_2
Location: Field: 181, Tree: 2
 Mars, 2018

  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP25 4TcSNP28 5TcSNP32
6TcSNP42 7TcSNP49 8TcSNP60 9TcSNP75 10TcSNP90
11TcSNP122 12TcSNP143 13TcSNP144 14TcSNP150 15TcSNP151
16TcSNP154 17TcSNP174 18TcSNP176 19TcSNP189 20TcSNP193
21TcSNP194 22TcSNP226 23TcSNP230 24TcSNP240 25TcSNP242
26TcSNP290 27TcSNP305 28TcSNP316 29TcSNP329 30TcSNP363
31TcSNP364 32TcSNP372 33TcSNP413 34TcSNP418 35TcSNP429
36TcSNP430 37TcSNP448 38TcSNP469 39TcSNP497 40TcSNP521
41TcSNP522 42TcSNP529 43TcSNP534 44TcSNP546 45TcSNP547
46TcSNP560 47TcSNP561 48TcSNP577 49TcSNP589 50TcSNP591
51TcSNP602 52TcSNP619 53TcSNP640 54TcSNP642 55TcSNP645
56TcSNP653 57TcSNP660 58TcSNP689 59TcSNP702 60TcSNP723
61TcSNP731 62TcSNP739 63TcSNP751 64TcSNP776 65TcSNP799
66TcSNP823 67TcSNP835 68TcSNP836 69TcSNP860 70TcSNP872
71TcSNP878 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP917
76TcSNP929 77TcSNP944 78TcSNP945 79TcSNP953 80TcSNP994
81TcSNP998 82TcSNP999 83TcSNP1034 84TcSNP1053 85TcSNP1060
86TcSNP1062 87TcSNP1063 88TcSNP1075 89TcSNP1096 90TcSNP1111
91TcSNP1112 92TcSNP1126 93TcSNP1149 94TcSNP1156 95TcSNP1175
96TcSNP1205 97TcSNP1253 98TcSNP1270 99TcSNP1309 100TcSNP1350
101TcSNP1383 102TcSNP1414 103TcSNP1439 104TcSNP1442 105TcSNP1458
106TcSNP1484 107TcSNP1520 108TcSNP1524 109Tcm001s00947643 110Tcm003s01336581
111Tcm003s07402719 112Tcm006s26664133