SNP Profiles of "GU 175"   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
2. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
3. _GC-01-100-5-17
GGGGTTGG___TTCCTTAATTTTAAGGAA
4. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
5. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
6. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
7. _GC-01-100-5-17
GGGGTTGGCCTTCCTTAATTTTAAGGAA
8. _GC-05-097-2-48
GGGGTTGGCCTTCCTTAATTTTAAGGAA
9. _GC-05-097-2-48
GGGGTTGGCCTTCCTTAATTTTAAGGAA
10. _GC-05-097-2-48
GGGGTTGGCCTTCCTTAATTTTAAGGAA
11. _GC-05-097-2-48
GGGGTTGGCCTTCCTTAATTTTAAGGAA
12. _GC-01-100-5-17
GG___TTGGGGAACCAAAAAAAATTGGAA
13. _MITC-000401
GGCCTTGGGGAACCAACCACGGTTAGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
2. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
3. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
4. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
5. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
6. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
7. _GC-01-100-5-17
CCGGGGCCAAGGGGAATTGGGGTTCCAG
8. _GC-05-097-2-48
CCGGGGCCAAGGGGAATTGGGGTTCCAG
9. _GC-05-097-2-48
CCGGGGCCAAGGGGAATTGGGGTTCCAG
10. _GC-05-097-2-48
CCGGGGCCAAGGGGAATTGGGGTTCCAG
11. _GC-05-097-2-48
CCGGGGCCAAGGGGAATTGGGGTTCCAG
12. _GC-01-100-5-17
GGGGGGGGTTGGGGAAAAGGGGTTGG___
13. _MITC-000401
CGAGGGGGATGGAGATAAGGGGTTCG___
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
2. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
3. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
4. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
5. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
6. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
7. _GC-01-100-5-17
___CCAACCGGGGAGCCCCCCAACCAAAA
8. _GC-05-097-2-48
___CCAACCGGGGAGCCCCCC___CCAAAA
9. _GC-05-097-2-48
___CCAACCGGGGAGCCCCCCAACCAAAA
10. _GC-05-097-2-48
___CCAACCGGGGAGCCCCCCAACCAAAA
11. _GC-05-097-2-48
___CCAACCGGGGAGCCCCCCAACCAAAA
12. _GC-01-100-5-17
AACCAA___GGCCAGCCCCGG___GG___AA
13. _MITC-000401
AACCCC___GGAAAGCCAAAA___AG___AG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
2. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
3. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
4. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
5. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
6. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
7. _GC-01-100-5-17
AACCTTGGAAGGTTTTAAGG___GGCCCC
8. _GC-05-097-2-48
AACCTTGGAAGGTTTTAAGG___GGCCCC
9. _GC-05-097-2-48
AACCTTGGAAGGTTTTAAGG___GGCCCC
10. _GC-05-097-2-48
AACCTTGGAAGGTTTTAAGG___GGCCCC
11. _GC-05-097-2-48
AACCTTGGAAGGTTTTAAGG___GGCCCC
12. _GC-01-100-5-17
AA______CCAACCAAAAAACCGGCC___GG
13. _MITC-000401
AA______CCGGAAAAAAACCCGGCC___GG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
2. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
3. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
4. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
5. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
6. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
7. _GC-01-100-5-17
CCGGCCGGCCAACCAACCTTCCCCGGGG
8. _GC-05-097-2-48
CCGGCCGGCCAACCAACCTTCCCCGGGG
9. _GC-05-097-2-48
CCGGCCGGCCAACCAACCTTCCCCGGGG
10. _GC-05-097-2-48
CCGGCCGGCCAACCAACCTTCCCCGGGG
11. _GC-05-097-2-48
CCGGCCGGCCAACCAACCTTCCCCGGGG
12. _GC-01-100-5-17
GGGGGGGGGGAAGGAA___AA___GGGGCC
13. _MITC-000401
GGAAAACGGGAAAAAG___AA___GGAACC
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
2. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
3. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
4. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
5. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
6. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
7. _GC-01-100-5-17
AACCGGTTCCTTCCCCTTCCTTTTTT___
8. _GC-05-097-2-48
AACCGGTTCCTTCCCCTTCCTTTTTT___
9. _GC-05-097-2-48
AACCGGTTCCTTCCCCTTCCTTTTTT___
10. _GC-05-097-2-48
AACCGGTTCCTTCCCCTTCCTTTTTT___
11. _GC-05-097-2-48
AACCGGTTCCTTCCCCTTCCTTTTTT___
12. _GC-01-100-5-17
AAGGGG______AAGG___AA___AAAAAA___
13. _MITC-000401
AAGGGG______AAAA___CC___AAGGAGAA
 85 86 87 88 89 90 91 92 93 94 95 96   
1. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
2. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
3. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
4. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
5. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGG___AGCCX_XX_X
6. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
7. _GC-01-100-5-17
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
8. _GC-05-097-2-48
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
9. _GC-05-097-2-48
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
10. _GC-05-097-2-48
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
11. _GC-05-097-2-48
GGTTCCCCGGGGCCCCGGACAGCCX_XX_X
12. _GC-01-100-5-17
GGAAGGGGCCGGGGCC___ACAGCCX_XX_X
13. _MITC-000401
AGAAAAGGCCAAAACC___ACAGAAX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._GU_175 GC-01-100-5-17
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
2._GU_175 GC-01-100-5-17
Location: Tree: 6
Notes: 6
 Mars, 2018
3._GU_175 GC-01-100-5-17
Location: Tree: 8
Notes: 8 > FP3
 Mars, 2018
4._GU_175 GC-01-100-5-17
Location: Tree: 9
Notes: 9
 Mars, 2018
5._GU_175 GC-01-100-5-17
Location: Tree: 11
Notes: 11 > FP2
 Mars, 2018
6._GU_175 GC-01-100-5-17
Location: Tree: 14
Notes: 14
 Mars, 2018
7._GU_175 GC-01-100-5-17
Location: Tree: 15
Notes: 15
 Mars, 2018
8._GU_175 GC-05-097-2-48
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018
9._GU_175 GC-05-097-2-48
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018
10._GU_175 GC-05-097-2-48
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018
11._GU_175 GC-05-097-2-48
Location: Tree: 5
Notes: 5
 Mars, 2018
12._GU_175 GC-01-100-5-17
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

USDA-SHRS United States of America

13._GU_175 MITC-000401
 Mars, 2018

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133