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NA 916 Group Name Theobroma cacao

Pound, F.J. (1938)
Cacao and Witchbroom Disease of South America with notes on other species of Theobroma. Archives of Cocoa Research 1: pp. 26-71.

Derivation: river NAnay.
Collected by Pound.
Location: R. Nanay, Peru.

Pound, 1938a [POU38A]. Fruit - unpigmented, half blanco, long oval, slightly warty, no conspicuous point nor bottle neck. Bartley, 1995a [BAR95A]. Pound describes the typical NANAY as above (pod colour between light/intermediate green) but fruits with different characteristics appear among the NA clones of today which result from seedling progenies of the original collections. Posnette, 1945a [POS45A]. Fan branches are characterised by relatively short (less than 2 cm) petioles in which the pulvini are not clearly separated until the leaf ages, when a shallow constriction may develop. The stamen filaments are always pigmented to some degree, usually heavily.

Notes: Collected in 1937.

Pound, 1938a [POU38A]. Pods were probably collected from 14 trees which were free of witches' broom disease.

Pound, 1943b [POU43B]. 708 plants were planted at Marper farm.

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Synonyms: NANAI 916, NANAY 916

PEDIGREE DETAILS

Putative Half-Sibs:: Group P1 Zhang, D. et al., 2009

Reference

Zhang, D., Boccara, M., Motilal, L., Mischke S., Johnson, E.S., Butler, D.R., Bailey, B. & Meinhardt, L. 2009
Molecular characterization of an earliest cacao (Theobroma cacao L.) collection from Upper Amazon using microsatellite DNA markers. Tree Genetics & Genomes. doi:10.1007/s11295-009-0212-2; NA 144; NA 179; NA 181; NA 183; NA 206; NA 226; NA 227; NA 229; NA 283; NA 286; NA 311; NA 322; NA 327; NA 342; NA 406; NA 427; NA 48; NA 507; NA 528; NA 62; NA 687; NA 689; NA 697; NA 720; NA 730; NA 733; NA 753; NA 79; NA 824; NA 841; NA 929

POPULATION

Guiltinan, Mark, 2019: 'Nanay' Population; Reference

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

GENOME/TRANSCRIPTOME DATA LINKS

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Guiltinan, Mark, 2019

Reference View Associated Data

BioProject: PRJNA558793 NCBI ENA FASTQ

Library Source: Genomic & Transcriptomic

Run: SRR14022553 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX10399122

BioSample: SAMN12500382

SampleName: NA-916

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000078

Run: SRR9938235 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686888

BioSample: SAMN12500382

SampleName: NA-916

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000078

Run: SRR9938241 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686882

BioSample: SAMN12500382

SampleName: NA-916

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000078

Run: SRR9938242 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686881

BioSample: SAMN12500382

SampleName: NA-916

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000078

Run: SRR9938218 NCBI ENA FASTQ

Library Source: Transcriptomic

Experiment: SRX6686905

BioSample: SAMN12500382

SampleName: NA-916

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000078

HELD IN

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Costa Rica, Centro Agronómico Tropical de Investigación y Enseñanza (CATIE): List received in 2018 Reference

Reference

Allan Mata 2018
Accession list for the International Cacao Collection at CATIE (IC3). Personal communication.
Notes

Excel file received by email.; • Accession: 21979; - Local Name: NA-916; - Year of Accession: 2006
Ghana, Cocoa Research Institute of Ghana (CRIG): List received in 2012 Reference

Reference

CRIG 2012
Cocoa accessions held in the Cocoa Research Institute of Ghana (CRIG). Francis Kwame Padi, personal communication, February 2012.; • Local Name: NA916
Trinidad and Tobago, International Cocoa Genebank, Trinidad (ICG,T): List received in 2011 Reference

Reference

CRU 2011
ICG,T accessions. CRU website.
Notes

Website visited 12th April 2011

Link Unavailable [http://sta.uwi.edu/cru/icgt-accessions.asp]; • Local Name: NA 916

DISEASE

Phytophthora: Resistant; Guiltinan, Mark, 2019

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

YIELD

Frances Bekele & Gillian Bidaisee, 2022: Pod Index: 27.0 (pods per kg dried beans); Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower

BEAN

Frances Bekele & Gillian Bidaisee, 2022: Colour: dark purple; Shape: elliptical; Number: 35.0; Total Wet Weight: 54.6 g; Cotyledon Dry Weight: 1.06 g; Cotyledon Length: 21.1 mm; Cotyledon Width: 13.0 mm; Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower

BUTTERFAT

Frances Bekele & Gillian Bidaisee, 2022: Testa: 5.10 %; Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower
Trinidad - CRU, 1998: Butterfat Content: 54.72 %; Testa: 7.67 %; Reference

Reference

Trinidad - CRU 1998
Fat Analysis Data. Data supplied on computer diskette by F. Bekele, CRU, Trinidad.
Notes

Trinidad - CRU, University of the West Indies Datafile: TTOFATDS TTO - Fat Analysis Germplasm: Data is provided on 410 accessions. Environment: No details given. Descriptors: Data for the fat content of the shell, including standard error and the butterfat content is presented. Methods: Ripe, open pollinated pods were harvested, 2 pods from each of 5 trees (10 pods per accession) were selected. The beans were then mixed thoroughly and a sub-sample taken. The sub-sample was then cleaned to remove the mucliage, oven dried and stored at room temperature until analysis. For each accession 2 bean samples (each consisting of 20 beans) were taken from the bulked sample. The beans were shelled and eaach sample was groung using a coffee grinder (2x30 seconds). The ground samples were then dried for 16 hours at 110 degrees C, cooled and stored in a dessicator at 25 degrees C until analysis. From the cried ground samples, a 2 gram sub-sample was weighed into a beaker, 100 ml of 4.0M HCl was added and the sample boiled for 30 minutes. The boiled sample was filtered and the residue washed with distilled water until clear of pigment. After washing, the filtered sample was placed in an extraction thimble and dried for 16 hours at 60 degrees C. The butterfat from the bean samples was extracted using the Soxtec System (Tecetor). Each dried sample was extracted for one hour using petroleum ether (40-60) as the solvent. The butterfat extracted from the sample was then dried in an oven for 30 minutes at 100 degrees C, cooled in a dessicator and the percentage butterfat determined on a dry matter basis.

Butterfat

FRUIT

Frances Bekele & Gillian Bidaisee, 2022: Shape: elliptical; Basal Constriction: moderate; Apex Form: mammillate; Rugosity: moderate; Length: 153.0 mm; Breadth: 75.0 mm; Colour: anthocyanin absent; Hardness: hard; Note: Hardness > 2.0 Mpa; Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower

PHENOTYPING

Fiona Lahive, 2017: Accession: RUQ 1334; Light Saturated Photosynthetic Rate: 7.62 μmol m² s^-1; Stomatal Conductance: 0.23 mol m² s^-1; Transpiration Rate: 2.12 mmol m² s^-1; Intrinsic Water Use Efficiency: 37.71 μmol mol^-1; Instantaneous Water Use Efficiency: 3.66 mmol mol^-1; Flush Size: 5; Leaf Area: 287.80 cm²; Leaf Dry Weight: 1.83 g; Specific Leaf Area: 160.40 cm² g^-1; Reference

Reference

Fiona Lahive 2017
Phenotypic data from climate change trials. Personal communication.
Notes

Data for single trees in ICQC,R. Each value is a mean of 2 time points with 6 leaves per tree (12 measurements), except flush size, which was 2 branches per tree (4 measurements).

Phenotyping

FLUSH

Frances Bekele & Gillian Bidaisee, 2022: Colour: intense anthocyanin; Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower

FLOWER

Frances Bekele & Gillian Bidaisee, 2022: Ligule Colour: intense anthocyanin; Stamen Colour: moderate anthocyanin; Sepal Length: 6.46 mm; Ligule Width: 2.35 mm; Ovule Number: 48; Style Length: 2.24 mm; Pedicel Colour: red; Reference

Reference

Frances Bekele & Gillian Bidaisee 2022
Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.
Notes

This single reference supercedes data entered previously and will be kept up-to-date to allow this information to be grouped together.

Yield Bean Butterfat Fruit Flush Flower

REFERENCES

Pound, F.J. (1938) Cacao and Witchbroom Disease of South America with notes on other species of Theobroma. Archives of Cocoa Research 1: pp. 26-71.

Zhang, D., Boccara, M., Motilal, L., Mischke S., Johnson, E.S., Butler, D.R., Bailey, B. & Meinhardt, L. (2009) Molecular characterization of an earliest cacao (Theobroma cacao L.) collection from Upper Amazon using microsatellite DNA markers. Tree Genetics & Genomes. doi:10.1007/s11295-009-0212-2

Guiltinan, Mark (2019) Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI

Allan Mata (2018) Accession list for the International Cacao Collection at CATIE (IC3). Personal communication.

CRIG (2012) Cocoa accessions held in the Cocoa Research Institute of Ghana (CRIG). Francis Kwame Padi, personal communication, February 2012.

CRU (2011) ICG,T accessions. CRU website.

Frances Bekele & Gillian Bidaisee (2022) Morphological data from the International Cocoa Collection (ICG,T) maintained by the Cocoa Research Centre (CRC), Trinidad & Tobago. Unpublished data on fruit, bean, flower and flush morphology supplied as an Excel spreadsheet by Frances Bekele. Last update March 2022.

Trinidad - CRU (1998) Fat Analysis Data. Data supplied on computer diskette by F. Bekele, CRU, Trinidad.

Fiona Lahive (2017) Phenotypic data from climate change trials. Personal communication.