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KER 6 Group Name Theobroma cacao

French Guiana - CIRAD-CP (1994)
Morphological characteristics of the clones held at CIRAD Guyane. Data supplied to ICGD on computer diskette. Dr. Ph. Lachenaud, CIRAD Guyane.

Derivation: river KERinioutou,.
Collected by Lachenaud.
Location: R. Kerinioutou, Oyapock, French Guiana.

Lachenaud, 1993a [LAC93A]. Habit - Tall trees. Leaf- pigmented flush leaves. Fruits - green and Amelonado shaped, similar to PINA. No symptoms of Witches Broom.

Notes: French Guiana - CIRAD-CP, 1994a [GUY94A] Collections made in 1990.

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POPULATION

Guiltinan, Mark, 2019: 'Guiana' Population; Reference

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

GENOME/TRANSCRIPTOME DATA LINKS

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Guiltinan, Mark, 2019

BioProject: PRJNA558793 NCBI ENA FASTQ

Library Source: Genomic & Transcriptomic

Run: SRR14022530 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX10399145

BioSample: SAMN12500402

SampleName: KER-6

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000169

Run: SRR9938266 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686857

BioSample: SAMN12500402

SampleName: KER-6

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000169

Run: SRR9938267 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686856

BioSample: SAMN12500402

SampleName: KER-6

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000169

Run: SRR9938339 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686784

BioSample: SAMN12500402

SampleName: KER-6

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000169

Run: SRR9938248 NCBI ENA FASTQ

Library Source: Transcriptomic

Experiment: SRX6686875

BioSample: SAMN12500402

SampleName: KER-6

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000169

DISEASE

Phytophthora: Susceptible; Guiltinan, Mark, 2019

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

REFERENCES

French Guiana - CIRAD-CP (1994) Morphological characteristics of the clones held at CIRAD Guyane. Data supplied to ICGD on computer diskette. Dr. Ph. Lachenaud, CIRAD Guyane.

Guiltinan, Mark (2019) Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI